RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 MPIP34949 423 aa10.26□□□□□ -0.77
CARMIL3-202ENST00000559694 CASP9P55211 416 aa10.26□□□□□ -0.77
CARMIL3-202ENST00000559694 RPS7P62081 194 aaKnown RBP10.26□□□□□ -0.77
CARMIL3-202ENST00000559694 FUBP1Q96AE4 644 aaKnown RBP10.26□□□□□ -0.77
CARMIL3-202ENST00000559694 TMIGD2Q96BF3 282 aa10.26□□□□□ -0.77
CARMIL3-202ENST00000559694 FBXL20Q96IG2 436 aa10.26□□□□□ -0.77
CARMIL3-202ENST00000559694 MRGPRX1Q96LB2 322 aa10.26□□□□□ -0.77
CARMIL3-202ENST00000559694 MARCH7Q9H992 704 aa10.26□□□□□ -0.77
CARMIL3-202ENST00000559694 ZBTB26Q9HCK0 441 aa10.26□□□□□ -0.77
CARMIL3-202ENST00000559694 ST14Q9Y5Y6 855 aa10.26□□□□□ -0.77
CARMIL3-202ENST00000559694 GLOD5A6NK44 160 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 LOC110117498-PIK3R3F6TDL0 507 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 ARHGEF15O94989 841 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 OLFM2O95897 454 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 PRLP01236 227 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 LHCGRP22888 699 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 RYKP34925 604 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 ETV4P43268 484 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 DGKQP52824 942 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 TAS2R50P59544 299 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 CEACAM7Q14002 265 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 ZNF423Q2M1K9 1284 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 C18orf21Q32NC0 220 aaPredicted RBP10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 DEFB134Q4QY38 66 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 PLXDC1Q8IUK5 500 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 OR52B6Q8NGF0 335 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 PKP4Q99569 1192 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 SLC12A9Q9BXP2 914 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 STRADBQ9C0K7 418 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 TMEM168Q9H0V1 697 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 FBRSL1Q9HCM7 1045 aaKnown RBP10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 CCNB1IP1Q9NPC3 277 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 COPS7AQ9UBW8 275 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 EBF1Q9UH73 591 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 MUTYHQ9UIF7 546 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 RPS6KA6Q9UK32 745 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 SLC9A8Q9Y2E8 581 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 PCDHGB3Q9Y5G1 929 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 AQP12BA6NM10 295 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 CLPXO76031 633 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 PDE9AO76083 593 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 DNASE1L3Q13609 305 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 HTR4Q13639 388 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 LRP8Q14114 963 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 TYW3Q6IPR3 259 aaKnown RBP10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 TSSK4Q6SA08 328 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 UGT2A3Q6UWM9 527 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 UNC5DQ6UXZ4 953 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 RABEPKQ7Z6M1 372 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 DCP2Q8IU60 420 aaKnown RBP10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 AQP12AQ8IXF9 295 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 GLB1L3Q8NCI6 653 aaPredicted RBP10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 FATE1Q969F0 183 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 NACC2Q96BF6 587 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 RBCK1Q9BYM8 510 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 KRT84Q9NSB2 600 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 CRNNQ9UBG3 495 aaPredicted RBP10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 A0A1B0GVT2 93 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 CCDC182A6NF36 153 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 TSPAN9O75954 239 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 RSL1D1O76021 490 aaKnown RBP10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 OR6A2O95222 327 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 NCBP2P52298 156 aaKnown RBP eCLIP10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 UNC50Q53HI1 259 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 SPIN4Q56A73 249 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 TRIM61Q5EBN2 209 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 USP30Q70CQ3 517 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 PACRGLQ8N7B6 248 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 ACVR1CQ8NER5 493 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 SUN5Q8TC36 379 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 C6orf106Q9H6K1 298 aaPredicted RBP10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 SEC14L3Q9UDX4 400 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 MRTO4Q9UKD2 239 aaKnown RBP10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 DLGAP4Q9Y2H0 992 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 PCDHGA2Q9Y5H1 932 aa10.25□□□□□ -0.77
CARMIL3-202ENST00000559694 FEZF1A0PJY2 475 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 AP3D1O14617 1153 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 WBP4O75554 376 aaKnown RBP10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 IL6P05231 212 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 C8orf89P0DMQ9 161 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 GLULP15104 373 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 MASP1P48740 699 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 CCT3P49368 545 aaKnown RBP10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 YPEL5P62699 121 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 CDKN3Q16667 212 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 RFTN2Q52LD8 501 aaPredicted RBP10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 ZNF57Q68EA5 555 aaPredicted RBP10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 OR9I1Q8NGQ6 314 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 PMEPA1Q969W9 287 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 SLC47A1Q96FL8 570 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 REXO5Q96IC2 774 aaKnown RBP10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 ZNF382Q96SR6 550 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 KCNH6Q9H252 994 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 MOV10Q9HCE1 1003 aaKnown RBP10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 LTB4R2Q9NPC1 389 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 IKZF3Q9UKT9 509 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 SAMHD1Q9Y3Z3 626 aaKnown RBP10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 EP300Q09472 2414 aaPredicted RBP10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 GVINP1Q7Z2Y8 2422 aa10.24□□□□□ -0.77
CARMIL3-202ENST00000559694 ASXL3Q9C0F0 2248 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms