RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SNX7Q9UNH6 387 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 PCDHGA7Q9Y5G6 932 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 C9JVG2 144 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 PRPS2P11908 318 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 BCKDHAP12694 445 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 CLDN6P56747 220 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 KCNK10P57789 538 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 MEF2AQ02078 507 aaPredicted RBP15.79■□□□□ 0.12
TPM1-219ENST00000559397 TRA2AQ13595 282 aaKnown RBP eCLIP15.79■□□□□ 0.12
TPM1-219ENST00000559397 TLR1Q15399 786 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 FBXO42Q6P3S6 717 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 BNC2Q6ZN30 1099 aaPredicted RBP15.79■□□□□ 0.12
TPM1-219ENST00000559397 RNF175Q8N4F7 328 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 C11orf24Q96F05 449 aaPredicted RBP15.79■□□□□ 0.12
TPM1-219ENST00000559397 APIPQ96GX9 242 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 SLC41A2Q96JW4 573 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 SARGQ9BW04 601 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 FAM60AQ9NP50 221 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 VPS29Q9UBQ0 182 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 PILRAQ9UKJ1 303 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 DCHS1Q96JQ0 3298 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 ADAMTS20P59510 1910 aa15.79■□□□□ 0.12
TPM1-219ENST00000559397 ASPDHA6ND91 283 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 FOXE1O00358 373 aaPredicted RBP15.78■□□□□ 0.12
TPM1-219ENST00000559397 EEDO75530 441 aaKnown RBP15.78■□□□□ 0.12
TPM1-219ENST00000559397 CIB2O75838 187 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 CCKBRP32239 447 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 SEPHS1P49903 392 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 PSME3P61289 254 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 REEP5Q00765 189 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 RELAQ04206 551 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 KPNB1Q14974 876 aaKnown RBP15.78■□□□□ 0.12
TPM1-219ENST00000559397 TRMT5Q32P41 509 aaKnown RBP15.78■□□□□ 0.12
TPM1-219ENST00000559397 PIGGQ5H8A4 983 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 ADCK2Q7Z695 626 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 KMT5CQ86Y97 462 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 LIX1Q8N485 282 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 RCBTB1Q8NDN9 531 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 HUS1BQ8NHY5 278 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 TCTN2Q96GX1 697 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 TMEM74Q96NL1 305 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 CDRT15Q96T59 188 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 MTERF1Q99551 399 aaKnown RBP15.78■□□□□ 0.12
TPM1-219ENST00000559397 SYNPO2LQ9H987 977 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 DLL3Q9NYJ7 618 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 DLGAP4Q9Y2H0 992 aa15.78■□□□□ 0.12
TPM1-219ENST00000559397 FEZF1A0PJY2 475 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 MAGEB17A8MXT2 336 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 HAT1O14929 419 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 ANGPT2O15123 496 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 CTSVO60911 334 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 MT-CO3P00414 261 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 NELFEP18615 380 aaKnown RBP15.77■□□□□ 0.12
TPM1-219ENST00000559397 MAPK1P28482 360 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 HSD11B2P80365 405 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 HIST2H2ACQ16777 129 aaPredicted RBP15.77■□□□□ 0.12
TPM1-219ENST00000559397 PHF19Q5T6S3 580 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 HES3Q5TGS1 186 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 HIST2H2AA3Q6FI13 130 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 ADNP2Q6IQ32 1131 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 RNF44Q7L0R7 432 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 PLD3Q8IV08 490 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 FAM9CQ8IZT9 166 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 D2HGDHQ8N465 521 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 DNAJC22Q8N4W6 341 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 GLB1L3Q8NCI6 653 aaPredicted RBP15.77■□□□□ 0.12
TPM1-219ENST00000559397 ZNF740Q8NDX6 193 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 UBE2E3Q969T4 207 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 SERPINI1Q99574 410 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 AIF1LQ9BQI0 150 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 GPATCH1Q9BRR8 931 aaKnown RBP15.77■□□□□ 0.12
TPM1-219ENST00000559397 BAIAP2L1Q9UHR4 511 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 CROTQ9UKG9 612 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 PPT2Q9UMR5 302 aa15.77■□□□□ 0.12
TPM1-219ENST00000559397 MDC1Q14676 2089 aaKnown RBP15.77■□□□□ 0.12
TPM1-219ENST00000559397 CNOT1A5YKK6 2376 aaKnown RBP15.77■□□□□ 0.11
TPM1-219ENST00000559397 DCDC2BA2VCK2 349 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 CCDC154A6NI56 674 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 FXYD1O00168 92 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 HCRTR1O43613 425 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 LCMT2O60294 686 aaKnown RBP15.76■□□□□ 0.11
TPM1-219ENST00000559397 ENTPD5O75356 428 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 PDE5AO76074 875 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 ETHE1O95571 254 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 CXCR2P25025 360 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 PIK3CBP42338 1070 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 GABRA4P48169 554 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 CLDN8P56748 225 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 ACTR3P61158 418 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 PTGR1Q14914 329 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 C16orf72Q14CZ0 275 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 ISXQ2M1V0 245 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 HPS6Q86YV9 775 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 VPS33AQ96AX1 596 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 FCRL4Q96PJ5 515 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 CLMPQ9H6B4 373 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 NT5DC2Q9H857 520 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 PDE7BQ9NP56 450 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 SIRT5Q9NXA8 310 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 LEF1Q9UJU2 399 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms