RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 SMYD1Q8NB12 490 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 FBXO15Q8NCQ5 510 aaPredicted RBP10.17□□□□□ -0.78
CUX1-217ENST00000558836 OR52E4Q8NGH9 312 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 ZFAND2BQ8WV99 257 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 C12orf66Q96MD2 445 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 FERD3LQ96RJ6 166 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 MCOLN1Q9GZU1 580 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 MAGIXQ9H6Y5 334 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 WDR26Q9H7D7 661 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 FANCEQ9HB96 536 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 CD93Q9NPY3 652 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 MIEF1Q9NQG6 463 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 SIRT5Q9NXA8 310 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 FBXL12Q9NXK8 326 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 KLHL20Q9Y2M5 609 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 AP3M1Q9Y2T2 418 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 SNX11Q9Y5W9 270 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 SCN3AQ9NY46 2000 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 PLPP1O14494 284 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 KELP23276 732 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 IGFBP5P24593 272 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 MVDP53602 400 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 PLA2G16P53816 162 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 IL5RAQ01344 420 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 LAIR2Q6ISS4 152 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 GALNT18Q6P9A2 607 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 Q6ZPB1 254 aaPredicted RBP10.17□□□□□ -0.78
CUX1-217ENST00000558836 MSANTD1Q6ZTZ1 278 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 C17orf64Q86WR6 236 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 FAM129CQ86XR2 697 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 DCUN1D3Q8IWE4 304 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 KLHDC8AQ8IYD2 350 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 SVOPLQ8N434 492 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 OR5K2Q8NHB8 316 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 C12orf43Q96C57 262 aaKnown RBP10.17□□□□□ -0.78
CUX1-217ENST00000558836 ISOC1Q96CN7 298 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 RHNO1Q9BSD3 238 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 CCDC90BQ9GZT6 254 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 RUBCNLQ9H714 662 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 TMEM184CQ9NVA4 438 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 CA5BQ9Y2D0 317 aa10.17□□□□□ -0.78
CUX1-217ENST00000558836 MUC22E2RYF6 1773 aaPredicted RBP10.17□□□□□ -0.78
CUX1-217ENST00000558836 MUC3AQ02505 3323 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 ANKDD1BA6NHY2 528 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 FOXE1O00358 373 aaPredicted RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 LCMT2O60294 686 aaKnown RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 APODP05090 189 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 SLC35G4P0C7Q5 338 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 TPP2P29144 1249 aaPredicted RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 CHI3L1P36222 383 aaPredicted RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 MAGEA2P43356 314 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 MAPK9P45984 424 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 PRIM2P49643 509 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 CDK9P50750 372 aaKnown RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 E2F2Q14209 437 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 MLF2Q15773 248 aaPredicted RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 ADAMTSL4Q6UY14 1074 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 CBLL1Q75N03 491 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 GPR155Q7Z3F1 870 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 ADGRF3Q8IZF5 1079 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 ATG16L2Q8NAA4 619 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 CHDHQ8NE62 594 aaPredicted RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 NFKBIDQ8NI38 313 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 INSM2Q96T92 566 aaPredicted RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 CHST8Q9H2A9 424 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 BTNL2Q9UIR0 455 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 C3orf18Q9UK00 162 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 GPSM3Q9Y4H4 160 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 TESMINQ9Y4I5 508 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 TRBV23OR9-2A0A075B6M9 112 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 TMEM229AB2RXF0 380 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 M0QX08 132 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 SUV39H1O43463 412 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 OR1F1O43749 312 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 ATE1O95260 518 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 CRHBPP24387 322 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 FMO3P31513 532 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 MAGEA10P43363 369 aaPredicted RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 HLCSP50747 726 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 ZNF33BQ06732 778 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 PCDH1Q08174 1060 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 SMN1Q16637 294 aaKnown RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 ZBED5Q49AG3 693 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 ANXA8L1Q5VT79 327 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 TTC23Q5W5X9 447 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 BORAQ6PGQ7 559 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 RD3Q7Z3Z2 195 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 PARP8Q8N3A8 854 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 METTL4Q8N3J2 472 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 WDR34Q96EX3 536 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 DGCR6LQ9BY27 220 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 RSPH9Q9H1X1 276 aaPredicted RBP10.16□□□□□ -0.78
CUX1-217ENST00000558836 RASSF1Q9NS23 344 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 TAAR2Q9P1P5 351 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 RPS6KA6Q9UK32 745 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 COL4A3Q01955 1670 aa10.16□□□□□ -0.78
CUX1-217ENST00000558836 TBC1D3DA0A087WVF3 549 aa10.15□□□□□ -0.78
CUX1-217ENST00000558836 TBC1D3IA0A087WXS9 549 aa10.15□□□□□ -0.78
CUX1-217ENST00000558836 TBC1D3EA0A087X179 549 aa10.15□□□□□ -0.78
CUX1-217ENST00000558836 TBC1D3KA0A087X1G2 549 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms