RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CHRNA9Q9UGM1 479 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 PCDHA7Q9UN72 937 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 FOXJ3Q9UPW0 622 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 TEX13DA0A0J9YY54 714 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 A0A0U1RQS6 177 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 ZCWPW2A0A1B0GU75 182 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 MBLAC1A4D2B0 266 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 TMEM191CA6NGB0 347 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 LILRA5A6NI73 299 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 TULP2O00295 520 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 MED7O43513 233 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 BUB1O43683 1085 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 RHBDL1O75783 438 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 SERPINI2O75830 405 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 CPNE6O95741 557 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 IL1BP01584 269 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 EPOP01588 193 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 APOHP02749 345 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 CSF2P04141 144 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 TFAP2AP05549 437 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 HIST1H2AGP0C0S8 130 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 CT45A8P0DMV1 189 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 CT45A9P0DMV2 189 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 F3P13726 295 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 GP9P14770 177 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 EZRP15311 586 aaKnown RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 ZNF23P17027 643 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 CDH3P22223 829 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 CERS1P27544 350 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 AXLP30530 894 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 DLSTP36957 453 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 PTGFRP43088 359 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 AMTP48728 403 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 PEX5P50542 639 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 THOP1P52888 689 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 PRRX1P54821 245 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 PITX1P78337 314 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 ZXDBP98169 803 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 PLP2Q04941 152 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 GABPAQ06546 454 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 SLC10A2Q12908 348 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 PLD1Q13393 1074 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 MTX1Q13505 466 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 RFTN1Q14699 578 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 OPCMLQ14982 345 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 TMEM132DQ14C87 1099 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 SPHARQ15513 63 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 DUOXA1Q1HG43 343 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 ITPRIPL2Q3MIP1 535 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 CT45A2Q5DJT8 189 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 ZNF311Q5JNZ3 666 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 SPDYCQ5MJ68 293 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 TRNP1Q6NT89 227 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 NIPAL3Q6P499 406 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 C16orf87Q6PH81 154 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 BLOC1S2Q6QNY1 142 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 OTUD6AQ7L8S5 288 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 EFL1Q7Z2Z2 1120 aaKnown RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 CTU1Q7Z7A3 348 aaKnown RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 NBPF5PQ86XG9 351 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 CNGA4Q8IV77 575 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 GPRC5AQ8NFJ5 357 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 OR6M1Q8NGM8 313 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 GIMAP1Q8WWP7 306 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 INPP5DQ92835 1189 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 HIST1H2ACQ93077 130 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 AZIN2Q96A70 460 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 PHF21BQ96EK2 531 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 ABHD8Q96I13 439 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 PIWIL1Q96J94 861 aaKnown RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 C4orf36Q96KX1 117 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 VPS35Q96QK1 796 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 OR1F2PQ96R84 312 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 JPH2Q9BR39 696 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 WRAP53Q9BUR4 548 aaKnown RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 FUNDC2Q9BWH2 189 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 SPRTNQ9H040 489 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 CLSTN2Q9H4D0 955 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 PLAC1Q9HBJ0 212 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 ERVK-18Q9QC07 812 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 RNF14Q9UBS8 474 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 ZDHHC2Q9UIJ5 367 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 ZNF490Q9ULM2 529 aaPredicted RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 STUB1Q9UNE7 303 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 MRPS33Q9Y291 106 aaKnown RBP3.5□□□□□ -1.85
TDP1-217ENST00000557782 ATG4BQ9Y4P1 393 aa3.5□□□□□ -1.85
TDP1-217ENST00000557782 WDR19Q8NEZ3 1342 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 A0A0G2JNG1 304 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 TMEM272A0A1B0GTI8 110 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 GOLGA8OA6NCC3 632 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 ANKRD61A6NGH8 418 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 PCP4L1A6NKN8 68 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 GOLGA8NF8WBI6 632 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 ARPC1BO15143 372 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 AKAP8O43823 692 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 EXTL3O43909 919 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 SDC3O75056 442 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 SNNO75324 88 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms