RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 GPR22Q99680 433 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 MRPL57Q9BQC6 102 aaKnown RBP4.57□□□□□ -1.68
ATXN3-246ENST00000557030 TUBA1CQ9BQE3 449 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 C16orf70Q9BSU1 422 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 C9orf16Q9BUW7 83 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 FTHL17Q9BXU8 183 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 TRPV6Q9H1D0 765 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 GBA3Q9H227 469 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 CXCL16Q9H2A7 254 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 HIPK3Q9H422 1215 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 RHOJQ9H4E5 214 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 MAGEE1Q9HCI5 957 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 SPAG4Q9NPE6 437 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 C20orf96Q9NUD7 363 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-246ENST00000557030 ARMC1Q9NVT9 282 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 DPP3Q9NY33 737 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 ADA2Q9NZK5 511 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 NCKIPSDQ9NZQ3 722 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 SEPT10Q9P0V9 454 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 HMGXB4Q9UGU5 601 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 FBXO4Q9UKT5 387 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 VANGL2Q9ULK5 521 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 FZD10Q9ULW2 581 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 STAP1Q9ULZ2 295 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 PSAT1Q9Y617 370 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 COPG1Q9Y678 874 aaKnown RBP4.57□□□□□ -1.68
ATXN3-246ENST00000557030 ZSWIM8A7E2V4 1837 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 THSD7BQ9C0I4 1608 aa4.57□□□□□ -1.68
ATXN3-246ENST00000557030 MCM3APO60318 1980 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 CASP8AP2Q9UKL3 1982 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 COL1A2P08123 1366 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 SCN4AP35499 1836 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 TRBV5-3A0A0A0MS03 114 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 A0A0G2JK05 382 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 ZCWPW2A0A1B0GU75 182 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 KANSL1LA0AUZ9 987 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 CCDC162PA2VCL2 907 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 CXorf65A6NEN9 183 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 TRIM64A6NGJ6 449 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 PSMD12O00232 456 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 EEF2KO00418 725 aaKnown RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 SDHDO14521 159 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 MRASO14807 208 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 XPO1O14980 1071 aaKnown RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 UBDO15205 165 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 TSPAN1O60635 241 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 SNAP91O60641 907 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 ATP6V1G1O75348 118 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 GPC4O75487 556 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 VTNP04004 478 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 GPIP06744 558 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 RBP1P09455 135 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 GOT1P17174 413 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 ARF4P18085 180 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 IL10P22301 178 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 PSMA4P25789 261 aaKnown RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 DCKP27707 260 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 EPHX2P34913 555 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 MLH1P40692 756 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 CASP2P42575 452 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 MATKP42679 507 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 HCAR3P49019 387 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 SULT1E1P49888 294 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 TKTL1P51854 596 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 NAGLUP54802 743 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 RAB10P61026 200 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 ATP6V0D1P61421 351 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 CRADDP78560 199 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 PHEXP78562 749 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 MPP1Q00013 466 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 MS4A2Q01362 244 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 ZNF33AQ06730 810 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 FOXM1Q08050 763 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 CDH17Q12864 832 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 FASTKQ14296 549 aaKnown RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 C16orf72Q14CZ0 275 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 ZNF829Q3KNS6 432 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 SLC25A52Q3SY17 297 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 RAB6CQ53S08 254 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 PPM1LQ5SGD2 360 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 MARCH8Q5T0T0 291 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 REP15Q6BDI9 236 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 PMF1Q6P1K2 205 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 TMEM88Q6PEY1 159 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 TTC33Q6PID6 262 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 BHLHA9Q7RTU4 235 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 PID1Q7Z2X4 250 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 GPR180Q86V85 440 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 DHFR2Q86XF0 187 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 CLVS1Q8IUQ0 354 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 SLC22A9Q8IVM8 553 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 CNTN4Q8IWV2 1026 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 SAMD14Q8IZD0 417 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-246ENST00000557030 ZNF567Q8N184 647 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 PELI3Q8N2H9 469 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 KDM1BQ8NB78 822 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 CCNYQ8ND76 341 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 BEST2Q8NFU1 509 aa4.56□□□□□ -1.68
ATXN3-246ENST00000557030 OR52N4Q8NGI2 321 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms