RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 JMJD1CQ15652 2540 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 IGKV3D-11A0A0A0MRZ8 115 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 TRBV11-1A0A0K0K1C0 115 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 CTAGE9A4FU28 777 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 FAM166BA8MTA8 275 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 AP3B1O00203 1094 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 SLC16A5O15375 505 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 AVILO75366 819 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 ITGA10O75578 1167 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 SERPIND1P05546 499 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 ENO3P13929 434 aaPredicted RBP8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 ALOX12P18054 663 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 DLX5P56178 289 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 MEF2AQ02078 507 aaPredicted RBP8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 CTBP1Q13363 440 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 NAE1Q13564 534 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 SNTB1Q13884 538 aaKnown RBP8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 GXYLT1Q4G148 440 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 GLIPR1L2Q4G1C9 344 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 SEL1L2Q5TEA6 688 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 ZNF549Q6P9A3 640 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 QSOX2Q6ZRP7 698 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 DENND6AQ8IWF6 608 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 ZZZ3Q8IYH5 903 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 CPNE9Q8IYJ1 553 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 ZNF454Q8N9F8 522 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 APCDD1LQ8NCL9 501 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 OR5M9Q8NGP3 310 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 CD200R1Q8TD46 325 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 KCNJ9Q92806 393 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 ZDHHC16Q969W1 377 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 PWWP2AQ96N64 755 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 GPR21Q99679 349 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 SLC6A16Q9GZN6 736 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 CCDC68Q9H2F9 335 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 CLEC4MQ9H2X3 399 aaPredicted RBP8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 TSPY26PQ9H489 355 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 DLL4Q9NR61 685 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 FBXO6Q9NRD1 293 aaPredicted RBP8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 PNPLA3Q9NST1 481 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 DEPPQ9NTK1 212 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 INTS10Q9NVR2 710 aaKnown RBP8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 ZNF358Q9NW07 568 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 KLHL42Q9P2K6 505 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 ST6GALNAC2Q9UJ37 374 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 ADAMTS6Q9UKP5 1117 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 PLEKHA6Q9Y2H5 1048 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 RPH3AQ9Y2J0 694 aaPredicted RBP8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 CAPN6Q9Y6Q1 641 aa8.42□□□□□ -1.06
HNRNPC-227ENST00000556897 TCRBV7S3A2A0A539 114 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 TCRBV16S1A1N1A0A5B0 115 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 PINLYPA6NC86 204 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 OR1F1O43749 312 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 CEP104O60308 925 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 MYO1DO94832 1006 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 TUBB4AP04350 444 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 ZNF888P0CJ79 500 aaPredicted RBP8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 NPPBP16860 134 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 PAMP19021 973 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 ACVR2AP27037 513 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 CLCN2P51788 898 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 TERF1P54274 439 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 PPIAP62937 165 aaKnown RBP8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 SKP1P63208 163 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 KIF5AQ12840 1032 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 PWP1Q13610 501 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 ZNF585AQ6P3V2 769 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 CASC4Q6P4E1 433 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 PAOXQ6QHF9 649 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 AGTRAPQ6RW13 159 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 C16orf47Q6ZP98 133 aaPredicted RBP8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 LIX1LQ8IVB5 337 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 PSD4Q8NDX1 1056 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 B3GNT7Q8NFL0 401 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 ABHD11Q8NFV4 315 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 RMND5BQ96G75 393 aaPredicted RBP8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 GPATCH1Q9BRR8 931 aaKnown RBP8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 TTYH2Q9BSA4 534 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 SGPP1Q9BX95 441 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 TSGA10Q9BZW7 698 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 TIMMDC1Q9NPL8 285 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 NECTIN3Q9NQS3 549 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 PRDM9Q9NQV7 894 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 KCMF1Q9P0J7 381 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 FBXW2Q9UKT8 454 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 ERVK-11Q9UQG0 969 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 PDE10AQ9Y233 779 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 DHRS7Q9Y394 339 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 FAM215AQ9Y5M1 114 aa8.41□□□□□ -1.06
HNRNPC-227ENST00000556897 A0A0G2JMM0 328 aa8.4□□□□□ -1.06
HNRNPC-227ENST00000556897 A0A0G2JNJ9 132 aa8.4□□□□□ -1.06
HNRNPC-227ENST00000556897 A0A1W2PPB8 328 aa8.4□□□□□ -1.06
HNRNPC-227ENST00000556897 A0A1W2PRS3 328 aa8.4□□□□□ -1.06
HNRNPC-227ENST00000556897 CTAGE15A4D2H0 777 aa8.4□□□□□ -1.06
HNRNPC-227ENST00000556897 FIGNL2A6NMB9 653 aa8.4□□□□□ -1.06
HNRNPC-227ENST00000556897 KIR3DP1A8MWS1 328 aa8.4□□□□□ -1.06
HNRNPC-227ENST00000556897 G3V3Y1 287 aa8.4□□□□□ -1.06
HNRNPC-227ENST00000556897 ACOT7O00154 380 aa8.4□□□□□ -1.06
HNRNPC-227ENST00000556897 PSMD12O00232 456 aaPredicted RBP8.4□□□□□ -1.06
HNRNPC-227ENST00000556897 PROM1O43490 865 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms