RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CLDN5O00501 218 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 FLRT2O43155 660 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 BUB3O43684 328 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 STX6O43752 255 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 CACNG3O60359 315 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 RPN1P04843 607 aaKnown RBP4.83□□□□□ -1.64
HIF1A-209ENST00000556827 FAM200BP0CF97 657 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 CD59P13987 128 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 ANXA7P20073 488 aaKnown RBP4.83□□□□□ -1.64
HIF1A-209ENST00000556827 MATKP42679 507 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 FUT6P51993 359 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 CDH8P55286 799 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 MYL6P60660 151 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 COG7P83436 770 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 CYP24A1Q07973 514 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 STK38Q15208 465 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 DECR1Q16698 335 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 SGSM1Q2NKQ1 1148 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 C10orf120Q5SQS8 335 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 OTUD3Q5T2D3 398 aaPredicted RBP4.83□□□□□ -1.64
HIF1A-209ENST00000556827 WBP2NLQ6ICG8 309 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 FAM122CQ6P4D5 195 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 BRAT1Q6PJG6 821 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 C19orf48Q6RUI8 117 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 ACOT1Q86TX2 421 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 NELFCDQ8IXH7 590 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 ARHGAP18Q8N392 663 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 OR1J2Q8NGS2 313 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 SGCDQ92629 289 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 TAAR8Q969N4 342 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 SIPA1Q96FS4 1042 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 ZNF396Q96N95 335 aaPredicted RBP4.83□□□□□ -1.64
HIF1A-209ENST00000556827 OR2A14Q96R47 310 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 KCNK16Q96T55 309 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 GABRG3Q99928 467 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 GPR174Q9BXC1 333 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 PLK3Q9H4B4 646 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 DPEP3Q9H4B8 488 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 ZSCAN16Q9H4T2 348 aaPredicted RBP4.83□□□□□ -1.64
HIF1A-209ENST00000556827 MAGEF1Q9HAY2 307 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 ZDHHC4Q9NPG8 344 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 AGPAT3Q9NRZ7 376 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 TMEM30AQ9NV96 361 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 FBXO2Q9UK22 296 aaPredicted RBP4.83□□□□□ -1.64
HIF1A-209ENST00000556827 FBXL2Q9UKC9 423 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 PLA2G4CQ9UP65 541 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 AMDHD2Q9Y303 409 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 OR2W1Q9Y3N9 320 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 SESN1Q9Y6P5 492 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 COL4A2P08572 1712 aa4.83□□□□□ -1.64
HIF1A-209ENST00000556827 CEP250Q9BV73 2442 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 UBE4BO95155 1302 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 PTPRJQ12913 1337 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 WDR87Q6ZQQ6 2873 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 GOLGA6L9A6NEM1 432 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 PRSS47A8MTI9 375 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 CLIC2O15247 247 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 RRP8O43159 456 aaKnown RBP4.82□□□□□ -1.64
HIF1A-209ENST00000556827 PLPP2O43688 288 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 DFNA5O60443 496 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 ZNF883P0CG24 379 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 CDH1P12830 882 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 GABRB1P18505 474 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 C21orf59P57076 290 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 MAP3K7CLP57077 242 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 PRAMEP78395 509 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 MRPS34P82930 218 aaKnown RBP4.82□□□□□ -1.64
HIF1A-209ENST00000556827 ACSM2AQ08AH3 577 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 MAD2L1Q13257 205 aaPredicted RBP4.82□□□□□ -1.64
HIF1A-209ENST00000556827 IRF3Q14653 427 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 KNOP1Q1ED39 458 aaKnown RBP4.82□□□□□ -1.64
HIF1A-209ENST00000556827 HLA-BQ31612 363 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 SOWAHCQ53LP3 525 aaPredicted RBP4.82□□□□□ -1.64
HIF1A-209ENST00000556827 FAM205BPQ63HN1 556 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 ACSM2BQ68CK6 577 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 ITPRIPL1Q6GPH6 555 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 SARM1Q6SZW1 724 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 UNQ6126/PRO20091Q6UXV3 157 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 SCARA5Q6ZMJ2 495 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 CFAP77Q6ZQR2 320 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 TUBA1AQ71U36 451 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 GLRX5Q86SX6 157 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 UNC93AQ86WB7 457 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 TMPRSS12Q86WS5 348 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 RNF113BQ8IZP6 322 aaKnown RBP4.82□□□□□ -1.64
HIF1A-209ENST00000556827 RASGEF1CQ8N431 466 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 SLC2A14Q8TDB8 520 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 DDI1Q8WTU0 396 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 SECTM1Q8WVN6 248 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 TAF4BQ92750 862 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 CCDC47Q96A33 483 aaKnown RBP4.82□□□□□ -1.64
HIF1A-209ENST00000556827 DHX58Q96C10 678 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 ERLEC1Q96DZ1 483 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 TUBA1CQ9BQE3 449 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 SLC2A11Q9BYW1 496 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 TRIM9Q9C026 710 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 GHITMQ9H3K2 345 aa4.82□□□□□ -1.64
HIF1A-209ENST00000556827 SMYD3Q9H7B4 428 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms