RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SRRM1Q8IYB3 904 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 ELMOD2Q8IZ81 293 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 OR4N4Q8N0Y3 316 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 PYROXD2Q8N2H3 581 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 COLGALT1Q8NBJ5 622 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 ST7LQ8TDW4 575 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 NSMCE1Q8WV22 266 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 FBXO32Q969P5 355 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 SPACA9Q96E40 222 aaPredicted RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 RNFT2Q96EX2 444 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 P2RY11Q96G91 374 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 BTN2A3PQ96KV6 586 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 KLHL15Q96M94 604 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 CCT8L2Q96SF2 557 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 PAFAH2Q99487 392 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 EBNA1BP2Q99848 306 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 TKTL2Q9H0I9 626 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 RAB6CQ9H0N0 254 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 LRRC40Q9H9A6 602 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 FBRSL1Q9HCM7 1045 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 KCNK9Q9NPC2 374 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 PPANQ9NQ55 473 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 EURLQ9NYK6 297 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 BFARQ9NZS9 450 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 SEPT10Q9P0V9 454 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 KLHL8Q9P2G9 620 aaPredicted RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 SPASTQ9UBP0 616 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 SERGEFQ9UGK8 458 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 MKLN1Q9UL63 735 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 GRID1Q9ULK0 1009 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 NDRG4Q9ULP0 352 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 CHMP2BQ9UQN3 213 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 AAR2Q9Y312 384 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 HBS1LQ9Y450 684 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 N6AMT1Q9Y5N5 214 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 TEX264Q9Y6I9 313 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 PLXNA3P51805 1871 aa4.96□□□□□ -1.61
SRP54-211ENST00000556445 MYO16Q9Y6X6 1858 aa4.96□□□□□ -1.61
SRP54-211ENST00000556445 MICAL3Q7RTP6 2002 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 LOC100509620A0A075B734 347 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 LOC102723996A0A087X1L8 192 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 GOLGA6L7A0A1B0GV03 622 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 TMEM120BA0PK00 339 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 MTMR11A4FU01 709 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 HTR3EA5X5Y0 456 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 ARHGAP42A6NI28 874 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 ANXA2P2A6NMY6 339 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 L7N2F9 121 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 CBFA2T3O75081 653 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 E2F6O75461 281 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 DIRAS3O95661 229 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 PTBP3O95758 552 aaKnown RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 PDGFBP01127 241 aaPredicted RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 MMP2P08253 660 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 IL6RP08887 468 aaPredicted RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 HAPLN1P10915 354 aaPredicted RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 ZNF8P17098 575 aaPredicted RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 PGAM1P18669 254 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 TCEA1P23193 301 aaKnown RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 PAX7P23759 505 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 RAB28P51157 221 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 NDST2P52849 883 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 GEMP55040 296 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 GPX6P59796 221 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 PITX1P78337 314 aaPredicted RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 PMP22Q01453 160 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 TFF2Q03403 129 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 CSTF3Q12996 717 aaKnown RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 FRG1Q14331 258 aaKnown RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 GAMTQ14353 236 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 VEPH1Q14D04 833 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 SPANXN3Q5MJ09 141 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 FNBP1LQ5T0N5 605 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 HHATQ5VTY9 493 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 FCRLBQ6BAA4 426 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 SLC8B1Q6J4K2 584 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 RGS7BPQ6MZT1 257 aaPredicted RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 KCTD9Q7L273 389 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 RRM2BQ7LG56 351 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 YTHDF3Q7Z739 585 aaKnown RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 SCD5Q86SK9 330 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 PRUNE1Q86TP1 453 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 MMP21Q8N119 569 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 ZNF567Q8N184 647 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 ATPAF2Q8N5M1 289 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 NHLRC2Q8NBF2 726 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 STKLD1Q8NE28 680 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 CADM4Q8NFZ8 388 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 OR52M1Q8NGK5 317 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 MBD3L2Q8NHZ7 208 aaPredicted RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 AGR3Q8TD06 166 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 ACMSDQ8TDX5 336 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 ZNF473Q8WTR7 871 aaKnown RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 SLC44A1Q8WWI5 657 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 CKAP2Q8WWK9 683 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 NDRG1Q92597 394 aaKnown RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 STAMBPL1Q96FJ0 436 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 REXO5Q96IC2 774 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms