RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 KLHL31Q9H511 634 aa12.99□□□□□ -0.33
PCNX4-209ENST00000555569 MMP25Q9NPA2 562 aa12.99□□□□□ -0.33
PCNX4-209ENST00000555569 WWOXQ9NZC7 414 aa12.99□□□□□ -0.33
PCNX4-209ENST00000555569 A1L4Q6 167 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 PRAMEF2O60811 474 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 C1QAP02745 245 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 RNH1P13489 461 aaKnown RBP12.98□□□□□ -0.33
PCNX4-209ENST00000555569 CD1DP15813 335 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 SPRP35270 261 aaPredicted RBP12.98□□□□□ -0.33
PCNX4-209ENST00000555569 ATP6V0D1P61421 351 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 STXBP1P61764 594 aaKnown RBP12.98□□□□□ -0.33
PCNX4-209ENST00000555569 SLBPQ14493 270 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCNX4-209ENST00000555569 MEP1AQ16819 746 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 C4orf17Q53FE4 359 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 CDKL4Q5MAI5 379 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 ZNF324BQ6AW86 544 aaPredicted RBP12.98□□□□□ -0.33
PCNX4-209ENST00000555569 QSOX2Q6ZRP7 698 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 CCDC25Q86WR0 208 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCNX4-209ENST00000555569 BEST3Q8N1M1 668 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 KRT78Q8N1N4 520 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 TTLQ8NG68 377 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 FBXO25Q8TCJ0 367 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 PTCHD1Q96NR3 888 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 TAAR6Q96RI8 345 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 TMEM79Q9BSE2 394 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 AICDAQ9GZX7 198 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 CNOT10Q9H9A5 744 aaKnown RBP12.98□□□□□ -0.33
PCNX4-209ENST00000555569 GPRC5BQ9NZH0 403 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 ABI3Q9P2A4 366 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 OSGIN2Q9Y236 505 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 MYO7BQ6PIF6 2116 aa12.98□□□□□ -0.33
PCNX4-209ENST00000555569 C4orf51C9J302 202 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 PSMD12O00232 456 aaPredicted RBP12.97□□□□□ -0.33
PCNX4-209ENST00000555569 TAPBPO15533 448 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 PRMT3O60678 531 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 RASAL1O95294 804 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 GSTM2P28161 218 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 GGT5P36269 586 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 MAGEA4P43358 317 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 HSPA7P48741 367 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 TDGF1P3P51864 188 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 SLC26A5P58743 744 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 TAS2R50P59544 299 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 RAB10P61026 200 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 BTG2P78543 158 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 OR4D1Q15615 310 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 TRADDQ15628 312 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 ZKSCAN8Q15776 578 aaPredicted RBP12.97□□□□□ -0.33
PCNX4-209ENST00000555569 KBTBD12Q3ZCT8 623 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 ACER2Q5QJU3 275 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 GRTP1Q5TC63 336 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 SULT1C3Q6IMI6 304 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 ZDHHC24Q6UX98 284 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 TMIGD1Q6UXZ0 262 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 ZNF572Q7Z3I7 529 aaPredicted RBP12.97□□□□□ -0.33
PCNX4-209ENST00000555569 CRLF3Q8IUI8 442 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 SLC5A8Q8N695 610 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 PPM1NQ8N819 430 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 CCT6BQ92526 530 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 NR4A3Q92570 626 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 GAL3ST3Q96A11 431 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 PITHD1Q9GZP4 211 aaPredicted RBP12.97□□□□□ -0.33
PCNX4-209ENST00000555569 RHBGQ9H310 441 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 NT5DC2Q9H857 520 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 DNAJC11Q9NVH1 559 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 CD274Q9NZQ7 290 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 COPG2Q9UBF2 871 aa12.97□□□□□ -0.33
PCNX4-209ENST00000555569 CACNA1DQ01668 2161 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 CLGNO14967 610 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 STK16O75716 305 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 FAM155BO75949 473 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 CRYABP02511 175 aaKnown RBP12.96□□□□□ -0.33
PCNX4-209ENST00000555569 STX2P32856 288 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 BTN3A2P78410 334 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 NAB1Q13506 487 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 FBXO48Q5FWF7 155 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 ZNF766Q5HY98 468 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 MAMDC2Q7Z304 686 aaPredicted RBP12.96□□□□□ -0.33
PCNX4-209ENST00000555569 CYP4X1Q8N118 509 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 CA13Q8N1Q1 262 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 SNX31Q8N9S9 440 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 PDPRQ8NCN5 879 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 ARMC2Q8NEN0 867 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 DNAJB8Q8NHS0 232 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 FBF1Q8TES7 1133 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 KIAA1191Q96A73 305 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 ESAMQ96AP7 390 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 SEC16BQ96JE7 1060 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 FAR2Q96K12 515 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 UBXN10Q96LJ8 280 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 NPAS2Q99743 824 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 EHD1Q9H4M9 534 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 PRDM9Q9NQV7 894 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 PTBP2Q9UKA9 531 aaKnown RBP12.96□□□□□ -0.33
PCNX4-209ENST00000555569 RNF112Q9ULX5 631 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 UNC79Q9P2D8 2635 aa12.96□□□□□ -0.33
PCNX4-209ENST00000555569 NBPF19A0A087WUL8 3843 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 CROCCQ5TZA2 2017 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 NOTCH2Q04721 2471 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms