RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SPRTNQ9H040 489 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-218ENST00000555213 NT5DC2Q9H857 520 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 ENAMQ9NRM1 1142 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 NDOR1Q9UHB4 597 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 CDC14AQ9UNH5 594 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 FIS1Q9Y3D6 152 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 CFAP47Q6ZTR5 3102 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 ANKDD1BA6NHY2 528 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 H3BMH7 237 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 MEN1O00255 615 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 DSCR3O14972 297 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 PIP5K1BO14986 540 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 DIAPH2O60879 1101 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 UBOX5O94941 541 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 CLDN9O95484 217 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 SERPINA6P08185 405 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 PRR35P0CG20 571 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 PIM1P11309 404 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-218ENST00000555213 PCNAP12004 261 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 ZNF28P17035 718 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 ALAS2P22557 587 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 STXBP1P61764 594 aaKnown RBP10.38□□□□□ -0.75
SHMT2-218ENST00000555213 ABHD18Q0P651 414 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 BNIP1Q12981 228 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 ABRAXAS2Q15018 415 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 PRTGQ2VWP7 1150 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 XKR7Q5GH72 579 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 SPDYAQ5MJ70 313 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 BROXQ5VW32 411 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 METTL21CQ5VZV1 264 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 TMEM198Q66K66 360 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 NIPAL1Q6NVV3 410 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 PRMT9Q6P2P2 845 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 SCIMPQ6UWF3 145 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 RNF165Q6ZSG1 346 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 TTLL10Q6ZVT0 673 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 ABHD13Q7L211 337 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 ZNF771Q7L3S4 317 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-218ENST00000555213 VN1R4Q7Z5H5 301 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 CLNKQ7Z7G1 428 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 PROSER1Q86XN7 944 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 CPSF7Q8N684 471 aaKnown RBP10.38□□□□□ -0.75
SHMT2-218ENST00000555213 CDYL2Q8N8U2 506 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 ZNF740Q8NDX6 193 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 METTL6Q8TCB7 284 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 TWIST2Q8WVJ9 160 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 MR1Q95460 341 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 MVB12AQ96EY5 273 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 LRRC37BQ96QE4 947 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 CENPKQ9BS16 269 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 EFHD1Q9BUP0 239 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 DPH1Q9BZG8 443 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 AKTIPQ9H8T0 292 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 FARSBQ9NSD9 589 aaKnown RBP10.38□□□□□ -0.75
SHMT2-218ENST00000555213 STARD5Q9NSY2 213 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 GIMAP2Q9UG22 337 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 TRPS1Q9UHF7 1281 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 ADGRE2Q9UHX3 823 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 PADI1Q9ULC6 663 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 ZNF490Q9ULM2 529 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-218ENST00000555213 RUVBL1Q9Y265 456 aaKnown RBP10.38□□□□□ -0.75
SHMT2-218ENST00000555213 PCDHGA11Q9Y5H2 935 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 PCM1Q15154 2024 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 IGF2RP11717 2491 aa10.38□□□□□ -0.75
SHMT2-218ENST00000555213 SNRNP200O75643 2136 aaKnown RBP10.37□□□□□ -0.75
SHMT2-218ENST00000555213 A0A088AWK7 358 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 ATP6AP2A0A1C7CYW4 349 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 SERTM1A2A2V5 107 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 TRPC5OSA6NMA1 111 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 C21orf140B9A014 251 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 MANBAO00462 879 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 P2RX6O15547 441 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 TLX3O43711 291 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-218ENST00000555213 SKAP2O75563 359 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-218ENST00000555213 CRCPO75575 148 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 CLEC3AO75596 197 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 ATP6AP2O75787 350 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 DCTN3O75935 186 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 ENO1P06733 434 aaKnown RBP10.37□□□□□ -0.75
SHMT2-218ENST00000555213 LINC00032P0C843 101 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 ZNF10P21506 573 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-218ENST00000555213 RORAP35398 523 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 STAT5AP42229 794 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 AVPR1BP47901 424 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 DCDP81605 110 aaKnown RBP10.37□□□□□ -0.75
SHMT2-218ENST00000555213 TGM3Q08188 693 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 HERC3Q15034 1050 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 HKDC1Q2TB90 917 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 GGTA1PQ4G0N0 100 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 PRAMEF17Q5VTA0 474 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 C1orf189Q5VU69 101 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 TRIM46Q7Z4K8 759 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 YTHDF3Q7Z739 585 aaKnown RBP10.37□□□□□ -0.75
SHMT2-218ENST00000555213 DTX1Q86Y01 620 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 DSELQ8IZU8 1212 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 ZCCHC10Q8TBK6 192 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 NT5CQ8TCD5 201 aa10.37□□□□□ -0.75
SHMT2-218ENST00000555213 NAF1Q96HR8 494 aaKnown RBP10.37□□□□□ -0.75
SHMT2-218ENST00000555213 RILPQ96NA2 401 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms