RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ARHGAP11AQ6P4F7 1023 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 FIP1L1Q6UN15 594 aaKnown RBP4.47□□□□□ -1.69
SYNE2-210ENST00000553455 Q6ZRP5 223 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 ZNF410Q86VK4 478 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 CATSPERDQ86XM0 798 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 ARL10Q8N8L6 244 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 NAPBQ9H115 298 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 WDR13Q9H1Z4 485 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 THAP9Q9H5L6 903 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 ATAD3AQ9NVI7 634 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 COMMD8Q9NX08 183 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 PSORS1C1Q9UIG5 152 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 GAB2Q9UQC2 676 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 SELENOKQ9Y6D0 94 aa4.47□□□□□ -1.69
SYNE2-210ENST00000553455 RPGRIP1LQ68CZ1 1315 aa4.46□□□□□ -1.69
SYNE2-210ENST00000553455 ABCC9O60706 1549 aa4.46□□□□□ -1.69
SYNE2-210ENST00000553455 SLC15A5A6NIM6 579 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 SLC1A7O00341 560 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 MAGEB2O15479 319 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 ZBTB14O43829 449 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 ECE2O60344 883 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 LRCH4O75427 683 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 ZFAND5O76080 213 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 STBD1O95210 358 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 CLDN1O95832 211 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 NUDT17P0C025 328 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 HOXB6P17509 224 aaKnown RBP4.46□□□□□ -1.7
SYNE2-210ENST00000553455 OR1D2P34982 312 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 ATP6V1E1P36543 226 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 OPRL1P41146 370 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 BTG1P62324 171 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 MTF1Q14872 753 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 MAPK11Q15759 364 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 PKN2Q16513 984 aaKnown RBP4.46□□□□□ -1.7
SYNE2-210ENST00000553455 FAM106AQ4KMX7 169 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 ATP1A1-AS1Q5TC04 95 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 ZNF776Q68DI1 518 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-210ENST00000553455 MACC1Q6ZN28 852 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 RABEPKQ7Z6M1 372 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 RNF149Q8NC42 400 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 MAPK15Q8TD08 544 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 ARHGAP45Q92619 1136 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 BPIFA2Q96DR5 249 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 FBXO17Q96EF6 278 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 PRAM1Q96QH2 718 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 GAL3ST4Q96RP7 486 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 FNDC4Q9H6D8 234 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-210ENST00000553455 PLCXD1Q9NUJ7 323 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 EXOC6BQ9Y2D4 811 aa4.46□□□□□ -1.7
SYNE2-210ENST00000553455 TCF20Q9UGU0 1960 aaKnown RBP4.45□□□□□ -1.7
SYNE2-210ENST00000553455 GPRASP1Q5JY77 1395 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 C2orf92A0A1B0GVN3 265 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 PRR23D1E9PI22 279 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-210ENST00000553455 BCAS2O75934 225 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-210ENST00000553455 ABHD2P08910 425 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 PRR23D2P0DMB1 279 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-210ENST00000553455 ODC1P11926 461 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 STMN1P16949 149 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 NT5C2P49902 561 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 TNFSF10P50591 281 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 SNRPD1P62314 119 aaKnown RBP4.45□□□□□ -1.7
SYNE2-210ENST00000553455 IRX4P78413 519 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 LCP2Q13094 533 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 PDE7AQ13946 482 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 CEACAM7Q14002 265 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 GK2Q14410 553 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-210ENST00000553455 TMEM30BQ3MIR4 351 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 SPANXN4Q5MJ08 99 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 TCEAL6Q6IPX3 200 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 DND1Q8IYX4 353 aaKnown RBP4.45□□□□□ -1.7
SYNE2-210ENST00000553455 THEM5Q8N1Q8 247 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 CHCHD4Q8N4Q1 142 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 OR6S1Q8NH40 331 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 MRGPRDQ8TDS7 321 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 SLC35C1Q96A29 364 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 OMA1Q96E52 524 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 MAGED4Q96JG8 741 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 PCDHB18PQ96TA0 734 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 IL12RB2Q99665 862 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 LRRC2Q9BYS8 371 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 WWTR1Q9GZV5 400 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 CACNG5Q9UF02 275 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 PILRAQ9UKJ1 303 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 PPP1R3CQ9UQK1 317 aa4.45□□□□□ -1.7
SYNE2-210ENST00000553455 MRPS28Q9Y2Q9 187 aaKnown RBP4.45□□□□□ -1.7
SYNE2-210ENST00000553455 NKX6-3A6NJ46 265 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 LMO7DNF2Z398 122 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 NR5A2O00482 541 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 CHUKO15111 745 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 CXCL14O95715 111 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 CPA3P15088 417 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 MYOGP15173 224 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 ZNF26P17031 533 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-210ENST00000553455 CTNNA2P26232 953 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 HLA-FP30511 346 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 SLC1A3P43003 542 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 CNTN1Q12860 1018 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 MSLNQ13421 630 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-210ENST00000553455 PLPP4Q5VZY2 271 aa4.44□□□□□ -1.7
SYNE2-210ENST00000553455 RAB12Q6IQ22 244 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms