RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 FAM53CQ9NYF3 392 aa14.08□□□□□ -0.16
MTHFD1-204ENST00000553405 SNX6Q9UNH7 406 aa14.08□□□□□ -0.16
MTHFD1-204ENST00000553405 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.08□□□□□ -0.16
MTHFD1-204ENST00000553405 TRAF6Q9Y4K3 522 aa14.08□□□□□ -0.16
MTHFD1-204ENST00000553405 PTGDR2Q9Y5Y4 395 aa14.08□□□□□ -0.16
MTHFD1-204ENST00000553405 SCN3AQ9NY46 2000 aa14.08□□□□□ -0.16
MTHFD1-204ENST00000553405 LOC400499M0QZD8 3231 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 IGLV3-12A0A075B6K2 115 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 NPIPB8E9PQR5 432 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 PLPP1O14494 284 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 ERI3O43414 337 aaKnown RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 SEMA3DO95025 777 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 TGFB1P01137 390 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 KRT6AP02538 564 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 KRT6BP04259 564 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 F8A1P23610 371 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 PTX3P26022 381 aaPredicted RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 BSGP35613 385 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 ARL1P40616 181 aaPredicted RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 OR1D4P47884 311 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 KRT6CP48668 564 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 RAB8AP61006 207 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 STXBP1P61764 594 aaKnown RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 ZNF33BQ06732 778 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 IFT88Q13099 833 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 DSG2Q14126 1118 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 HERC3Q15034 1050 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 NKAIN1Q4KMZ8 207 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 DEFB134Q4QY38 66 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 TMEM35AQ53FP2 167 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 SGO1Q5FBB7 561 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 PRMT9Q6P2P2 845 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 FAM199XQ6PEV8 388 aaPredicted RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 RGS9BPQ6ZS82 235 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 NLGN4XQ8N0W4 816 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 ESX1Q8N693 406 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 METTL27Q8N6F8 245 aaPredicted RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 NLGN4YQ8NFZ3 816 aaPredicted RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 CT55Q8WUE5 264 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 CKAP2Q8WWK9 683 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 SELENOMQ8WWX9 145 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 SREK1Q8WXA9 508 aaKnown RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 MTFMTQ96DP5 389 aaKnown RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 DPH2Q9BQC3 489 aaPredicted RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 SLC26A1Q9H2B4 701 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 CCDC86Q9H6F5 360 aaKnown RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 MANSC1Q9H8J5 431 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 EML4Q9HC35 981 aaKnown RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 INTS9Q9NV88 658 aaKnown RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 IRAK4Q9NWZ3 460 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 RAP2CQ9Y3L5 183 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 NAALAD2Q9Y3Q0 740 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 DSPP15924 2871 aaKnown RBP14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 USP24Q9UPU5 2620 aa14.07□□□□□ -0.16
MTHFD1-204ENST00000553405 MAP1BP46821 2468 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 LOC101059948A0A1B0GTJ6 334 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 H0YIG0 161 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 SGK494L7N484 410 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 RTCAO00442 366 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 SH3BGRLO75368 114 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 ULK1O75385 1050 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 SNUPNO95149 360 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 JUNP05412 331 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 HSD3B1P14060 373 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 ALAS2P22557 587 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 HSD3B2P26439 372 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 HMOX2P30519 316 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 EFNA3P52797 238 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 ARFIP1P53367 373 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 PCBP4P57723 403 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 DCDP81605 110 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 ABHD18Q0P651 414 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 CSTF3Q12996 717 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 NDUFA9Q16795 377 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 XKR7Q5GH72 579 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 SH2D4BQ5SQS7 431 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 Q6ZSR9 355 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 CACNA2D3Q8IZS8 1091 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 CLYBLQ8N0X4 340 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 OR5T3Q8NGG3 340 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 OR2T11Q8NH01 316 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 CCT6BQ92526 530 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 C17orf62Q9BQA9 187 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 SORBS1Q9BX66 1292 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 TXLNGQ9NUQ3 528 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 THAP1Q9NVV9 213 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 CTSFQ9UBX1 484 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 PADI1Q9ULC6 663 aa14.06□□□□□ -0.16
MTHFD1-204ENST00000553405 URB1O60287 2271 aaKnown RBP14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 A0A0G2JN53 185 aa14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 ZNF860A6NHJ4 632 aa14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 VSTM2BA6NLU5 285 aa14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 SAP18O00422 153 aaKnown RBP14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 RDH16O75452 317 aa14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 KLF7O75840 302 aaPredicted RBP14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 HSPA4LO95757 839 aa14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 WT1P19544 449 aaPredicted RBP14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 PRPH2P23942 346 aa14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 ATP5A1P25705 553 aaKnown RBP14.05□□□□□ -0.16
MTHFD1-204ENST00000553405 EIF2S3P41091 472 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms