RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 PDXKO00764 312 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 KLF11O14901 512 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 LSM1O15116 133 aaKnown RBP3.96□□□□□ -1.78
USP44-208ENST00000552440 SLC22A2O15244 555 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 PRAMEF2O60811 474 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 SNAI1O95863 264 aaPredicted RBP3.96□□□□□ -1.78
USP44-208ENST00000552440 AKR1A1P14550 325 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 YWHAQP27348 245 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 DPP4P27487 766 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 SPAM1P38567 509 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 CCR4P51679 360 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 DAOAP59103 153 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 YWHAGP61981 247 aaKnown RBP eCLIP3.96□□□□□ -1.78
USP44-208ENST00000552440 RHAGQ02094 409 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 SLC18A2Q05940 514 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 PMPCAQ10713 525 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 TRAP1Q12931 704 aaKnown RBP3.96□□□□□ -1.78
USP44-208ENST00000552440 GAB1Q13480 694 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 ACKR1Q16570 336 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 POM121L1PQ3SYA9 428 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 TEX44Q53QW1 395 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 ARL13AQ5H913 290 aaPredicted RBP3.96□□□□□ -1.78
USP44-208ENST00000552440 AGAP6Q5VW22 663 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 IL23RQ5VWK5 629 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 MLIPQ5VWP3 458 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 PTRHD1Q6GMV3 140 aaKnown RBP3.96□□□□□ -1.78
USP44-208ENST00000552440 ZSCAN25Q6NSZ9 544 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 ZNF852Q6ZMS4 543 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 IRF2BP2Q7Z5L9 587 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 GRASPQ7Z6J2 395 aaPredicted RBP3.96□□□□□ -1.78
USP44-208ENST00000552440 ADGRG3Q86Y34 549 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 LCORLQ8N3X6 602 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 ANKFN1Q8N957 763 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 OR4K14Q8NGD5 310 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 OR5D13Q8NGL4 314 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 OR13F1Q8NGS4 319 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 CDC26Q8NHZ8 85 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 LPIN2Q92539 896 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 ERLEC1Q96DZ1 483 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 STAMBPL1Q96FJ0 436 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 SFXN2Q96NB2 322 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 PRR25Q96S07 402 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 PCGF1Q9BSM1 259 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 ROPN1BQ9BZX4 212 aaPredicted RBP3.96□□□□□ -1.78
USP44-208ENST00000552440 WWP1Q9H0M0 922 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 ADARB2Q9NS39 739 aaKnown RBP3.96□□□□□ -1.78
USP44-208ENST00000552440 MRPL22Q9NWU5 206 aaKnown RBP3.96□□□□□ -1.78
USP44-208ENST00000552440 ANKRD10Q9NXR5 420 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 FLRT1Q9NZU1 646 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 ABT1Q9ULW3 272 aaKnown RBP3.96□□□□□ -1.78
USP44-208ENST00000552440 STAP1Q9ULZ2 295 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 ERVK-19Q9WJR5 959 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 COL4A3Q01955 1670 aa3.96□□□□□ -1.78
USP44-208ENST00000552440 AQRO60306 1485 aaKnown RBP eCLIP3.96□□□□□ -1.78
USP44-208ENST00000552440 CLASP1Q7Z460 1538 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TRGV11A0A075B6L2 103 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TRAV26-1A0A087WT03 109 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 NEMP2A6NFY4 417 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 AP4M1O00189 453 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 FOXE1O00358 373 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 VCYO14598 125 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ARPC3O15145 178 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TLX3O43711 291 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 LCMT2O60294 686 aaKnown RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 NME2P1O60361 137 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TM7SF2O76062 418 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 C1RP00736 705 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MBP02144 154 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 CSN3P07498 182 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 IL6RP08887 468 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 CDK4P11802 303 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ETFAP13804 333 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 UGT1A1P22309 533 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MPZP25189 248 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 NDUFS1P28331 727 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 EVI2BP34910 448 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 HSD17B3P37058 310 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ETV5P41161 510 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 PTGFRP43088 359 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 NAMPTP43490 491 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 OR3A1P47881 315 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 NUMBP49757 651 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 B2MP61769 119 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 CSNK2A1P68400 391 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 SIM1P81133 766 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 DR1Q01658 176 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ENPEPQ07075 957 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 FGL1Q08830 312 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MERTKQ12866 999 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 GPR176Q14439 515 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 NR1D2Q14995 579 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 HERC3Q15034 1050 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 STK38Q15208 465 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TATDN3Q17R31 274 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 CTU2Q2VPK5 515 aaKnown RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 LACTB2Q53H82 288 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 TREML2Q5T2D2 321 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 SLC25A25Q6KCM7 469 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TTC27Q6P3X3 843 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 BLOC1S2Q6QNY1 142 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms