RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 TUBA3EQ6PEY2 450 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 TMIGD1Q6UXZ0 262 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 C3orf62Q6ZUJ4 267 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 RPS19BP1Q86WX3 136 aaKnown RBP10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 GPSM1Q86YR5 675 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 OR5T3Q8NGG3 340 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 ELP5Q8TE02 316 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 CREB3L4Q8TEY5 395 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 THAP3Q8WTV1 239 aaPredicted RBP10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 RHBDF1Q96CC6 855 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 TSNARE1Q96NA8 513 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 MCMBPQ9BTE3 642 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 COPG2Q9UBF2 871 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 MRPS33Q9Y291 106 aaKnown RBP10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 MDC1Q14676 2089 aaKnown RBP10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 NBPF19A0A087WUL8 3843 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 TCRBV16S1A1N1A0A5B0 115 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 OR2W5A6NFC9 320 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 ANKDD1BA6NHY2 528 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 FCHO1O14526 889 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 CLEC3AO75596 197 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 STK16O75716 305 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 WDR47O94967 919 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 UNC5CO95185 931 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 F10P00742 488 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 S100BP04271 92 aaPredicted RBP10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 SPRP35270 261 aaPredicted RBP10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 GP5P40197 560 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 CYB561P49447 251 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 PGGT1BP53609 377 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 HSD17B7P56937 341 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 RAB8AP61006 207 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 OC90Q02509 493 aaPredicted RBP10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 FASTKD3Q14CZ7 662 aaKnown RBP10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 TGFBIQ15582 683 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 HIST2H2ACQ16777 129 aaPredicted RBP10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 PAGE2BQ5JRK9 111 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 GRTP1Q5TC63 336 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 HIST2H2AA3Q6FI13 130 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 SLCO4C1Q6ZQN7 724 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 CCDC91Q7Z6B0 441 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 CRLF3Q8IUI8 442 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 CEP97Q8IW35 865 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 ANKRD53Q8N9V6 530 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 MDS2Q8NDY4 140 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 SRFBP1Q8NEF9 429 aaKnown RBP10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 SPATA4Q8NEY3 305 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 ANKRD49Q8WVL7 239 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 TSLPQ969D9 159 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 UBE2E3Q969T4 207 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 GAL3ST3Q96A11 431 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 TMEM125Q96AQ2 219 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 SCMH1Q96GD3 660 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 ROGDIQ9GZN7 287 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 RAB17Q9H0T7 212 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 CDCP1Q9H5V8 836 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 TRIM45Q9H8W5 580 aaPredicted RBP10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 SAYSD1Q9NPB0 183 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 DNAJC11Q9NVH1 559 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 WWOXQ9NZC7 414 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 IKZF3Q9UKT9 509 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 ENTPD4Q9Y227 616 aa10.21□□□□□ -0.77
VTI1BP3-201ENST00000550220 UNC79Q9P2D8 2635 aa10.21□□□□□ -0.78
VTI1BP3-201ENST00000550220 NUP210LQ5VU65 1888 aa10.21□□□□□ -0.78
VTI1BP3-201ENST00000550220 SVILO95425 2214 aa10.21□□□□□ -0.78
VTI1BP3-201ENST00000550220 IGKV3D-11A0A0A0MRZ8 115 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 TRGV8A0A0C4DH27 118 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 CCDC189A1A4V9 331 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 ASPDHA6ND91 283 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 LRIT2A6NDA9 550 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 SAGE2PA6NJ88 616 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 GABRR3A8MPY1 467 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 B3GALT2O43825 422 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 SP1P08047 785 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 CCDC166P0CW27 439 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 SSTR1P30872 391 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 CASQ1P31415 396 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 TRHRP34981 398 aaPredicted RBP10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 DCTP40126 519 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 HNF4AP41235 474 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 CLCN2P51788 898 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 OLR1P78380 273 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 BTN3A2P78410 334 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 ALDH6A1Q02252 535 aaKnown RBP10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 HYAL2Q12891 473 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 NAB1Q13506 487 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 SLBPQ14493 270 aaKnown RBP eCLIP10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 EFTUD2Q15029 972 aaKnown RBP eCLIP10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 TOR1AIP1Q5JTV8 583 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 SPINK14Q6IE38 97 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 SLC25A25Q6KCM7 469 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 TRIM40Q6P9F5 258 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 RPTNQ6XPR3 784 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 FJX1Q86VR8 437 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZNF595Q8IYB9 648 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 CYP4X1Q8N118 509 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 EID3Q8N140 333 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 CA13Q8N1Q1 262 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 ARMC10Q8N2F6 343 aa10.2□□□□□ -0.78
VTI1BP3-201ENST00000550220 STAG3L4Q8TBR4 150 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms