RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 IGFBP1P08833 259 aaPredicted RBP14.73□□□□□ -0.05
CNOT9-208ENST00000542068 ADRA2AP08913 450 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 S100A1P23297 94 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 MC1RQ01726 317 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 CCSMST1Q4G0I0 132 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 MPPE1Q53F39 396 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 SZRD1Q7Z422 152 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 NFKBIDQ8NI38 313 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 ADAMTS19Q8TE59 1207 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 TMEM203Q969S6 136 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 TXNDC15Q96J42 360 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 HRASLS5Q96KN8 279 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 HTATIP2Q9BUP3 242 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 EMILIN2Q9BXX0 1053 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 MMP28Q9H239 520 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 CWH43Q9H720 699 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 ZNF556Q9HAH1 456 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 DNAJC11Q9NVH1 559 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 ITM2BQ9Y287 266 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 WNT6Q9Y6F9 365 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 CCDC88CQ9P219 2028 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 CHD5Q8TDI0 1954 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 TMEM202A6NGA9 273 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 SAGE2PA6NJ88 616 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 HAT1O14929 419 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 CSF2P04141 144 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 HNRNPFP52597 415 aaKnown RBP14.73□□□□□ -0.05
CNOT9-208ENST00000542068 TUBA1BP68363 451 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 NTHL1P78549 312 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 MEF2AQ02078 507 aaPredicted RBP14.73□□□□□ -0.05
CNOT9-208ENST00000542068 FADDQ13158 208 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 ARSIQ5FYB1 569 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 ARMC4Q5T2S8 1044 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 PLPP4Q5VZY2 271 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 TUBA1AQ71U36 451 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 VASH1Q7L8A9 365 aaPredicted RBP14.73□□□□□ -0.05
CNOT9-208ENST00000542068 OR52E4Q8NGH9 312 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 PXYLP1Q8TE99 480 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 C7orf34Q96L11 122 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 TRNT1Q96Q11 434 aaKnown RBP14.73□□□□□ -0.05
CNOT9-208ENST00000542068 GABARAPL1Q9H0R8 117 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 ZNF226Q9NYT6 803 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 NDUFAF4Q9P032 175 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 VPS29Q9UBQ0 182 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 WBP11Q9Y2W2 641 aaKnown RBP14.73□□□□□ -0.05
CNOT9-208ENST00000542068 LYVE1Q9Y5Y7 322 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 BACE2Q9Y5Z0 518 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 HSPE1-MOB4S4R3N1 261 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 GBF1Q92538 1859 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 ATG2BQ96BY7 2078 aa14.73□□□□□ -0.05
CNOT9-208ENST00000542068 FZD6O60353 706 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 APOL3O95236 402 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 CD22P20273 847 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 CD9P21926 228 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 GGT2P36268 569 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 NKX3-2P78367 333 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 B4GALNT1Q00973 533 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 PTSQ03393 145 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 CSTF3Q12996 717 aaKnown RBP14.72□□□□□ -0.05
CNOT9-208ENST00000542068 DOC2BQ14184 412 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 PNCKQ6P2M8 343 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 C22orf39Q6P5X5 142 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 TPRG1Q6ZUI0 275 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 VPS35Q96QK1 796 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 BCL7BQ9BQE9 202 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 RIOK2Q9BVS4 552 aaKnown RBP14.72□□□□□ -0.05
CNOT9-208ENST00000542068 SLC46A2Q9BY10 475 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 SGK2Q9HBY8 427 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 PLSCR3Q9NRY6 295 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 ZNF221Q9UK13 617 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 GUCY1B2O75343 617 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 ABLIM3O94929 683 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 SOX6P35712 828 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 SLC15A1P46059 708 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 BDKRB1P46663 353 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 FAHD1Q6P587 224 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 PTCHD4Q6ZW05 846 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 NEK10Q6ZWH5 1172 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 HMGN2P46Q86SG4 172 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 TAGAPQ8N103 731 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 PKP4Q99569 1192 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 MGLLQ99685 303 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 ZDHHC3Q9NYG2 299 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 DNAJC27Q9NZQ0 273 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 PRKAB1Q9Y478 270 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 N6AMT1Q9Y5N5 214 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 C5orf22Q49AR2 442 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 TPGS2Q68CL5 300 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 SLC34A3Q8N130 599 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 CIDECQ96AQ7 238 aaPredicted RBP14.72□□□□□ -0.05
CNOT9-208ENST00000542068 TMEM159Q96B96 161 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 TESCQ96BS2 214 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 ASAH2Q9NR71 780 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 PCDHB11Q9Y5F2 797 aa14.72□□□□□ -0.05
CNOT9-208ENST00000542068 ISPDA4D126 451 aa14.71□□□□□ -0.05
CNOT9-208ENST00000542068 PLK4O00444 970 aa14.71□□□□□ -0.05
CNOT9-208ENST00000542068 GPX2P18283 190 aa14.71□□□□□ -0.05
CNOT9-208ENST00000542068 CYP2A7P20853 494 aa14.71□□□□□ -0.05
CNOT9-208ENST00000542068 NNMTP40261 264 aa14.71□□□□□ -0.05
CNOT9-208ENST00000542068 UGT2B15P54855 530 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms