RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 NUMA1Q14980 2115 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 C1orf226A1L170 272 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 GLTPD2A6NH11 291 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 MED26O95402 600 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 GASTP01350 101 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 KRT8P05787 483 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 PRKAR2AP13861 404 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 GABRB1P18505 474 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 IL1RNP18510 177 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 SDHBP21912 280 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 CXCR2P25025 360 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 SOAT1P35610 550 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 SLC15A1P46059 708 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 RFX2P48378 723 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 RPS13P62277 151 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 TLE2Q04725 743 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 TRIM60Q495X7 471 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 Q5BKY6 102 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 TMC5Q6UXY8 1006 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 ATCAYQ86WG3 371 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 RNF130Q86XS8 419 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 RBM45Q8IUH3 476 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 LACC1Q8IV20 430 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 MMAAQ8IVH4 418 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 MYDGFQ969H8 173 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 CASD1Q96PB1 797 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 HHIPQ96QV1 700 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR2A14Q96R47 310 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 BCL7BQ9BQE9 202 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 KLF16Q9BXK1 252 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 CHST8Q9H2A9 424 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 SGK2Q9HBY8 427 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 CTPS2Q9NRF8 586 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 TRPM5Q9NZQ8 1165 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 C5AR2Q9P296 337 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 MALT1Q9UDY8 824 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 PCDHGB3Q9Y5G1 929 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 ARHGEF33A8MVX0 844 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 TMEM189-UBE2V1I3L0A0 370 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 SCAMP2O15127 329 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 ENTPD6O75354 484 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 SEMA3DO95025 777 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 GALTP07902 379 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 NSG1P42857 185 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 MVDP53602 400 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 LRRC74AQ0VAA2 488 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 AGAP6Q5VW22 663 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 LYPD8Q6UX82 237 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 CHST14Q8NCH0 376 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 COQ8BQ96D53 544 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZFYVE19Q96K21 471 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 AGAP4Q96P64 663 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 MCCC1Q96RQ3 725 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR51B5Q9H339 312 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 PAQR5Q9NXK6 330 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 PLXNB3Q9ULL4 1909 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 PTTG1O95997 202 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 TGFB1P01137 390 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 IGHA2P01877 340 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 PDHA2P29803 388 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 HTR3AP46098 478 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 LMAN2Q12907 356 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 DUSP7Q16829 419 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 MPEG1Q2M385 716 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 TMEM150AQ86TG1 271 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 THOC6Q86W42 341 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 NPAS3Q8IXF0 933 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 HUS1BQ8NHY5 278 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 WDR48Q8TAF3 677 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 UPF1Q92900 1129 aaKnown RBP eCLIP9.94□□□□□ -0.821e-6■□□□□ 10.5
CDC42SE1-207ENST00000540998 CEP295NLQ96MC4 621 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 VPS35Q96QK1 796 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 EPYCQ99645 322 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 SLC12A9Q9BXP2 914 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 BRD9Q9H8M2 597 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 RDH14Q9HBH5 336 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZNF334Q9HCZ1 680 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZNF221Q9UK13 617 aa9.94□□□□□ -0.82
CDC42SE1-207ENST00000540998 TRBV4-1A0A0J9YWV2 114 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 A0A1W2PQ09 198 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ISPDA4D126 451 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 PLD2O14939 933 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SEPT4O43236 478 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 KRT75O95678 551 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SLC16A8O95907 504 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 IDSP22304 550 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CHMP24386 653 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 UGT2B10P36537 528 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SELENOWP63302 87 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 TUBA1BP68363 451 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZNF79Q15937 498 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 SLC5A12Q1EHB4 618 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 TBRG1Q3YBR2 411 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 LIPKQ5VXJ0 399 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 PAMR1Q6UXH9 720 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 PTCHD4Q6ZW05 846 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 TUBA1AQ71U36 451 aa9.93□□□□□ -0.82
CDC42SE1-207ENST00000540998 CHST9Q7L1S5 443 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms