RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ITPKBP27987 946 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 RBMS1P29558 406 aaKnown RBP10.11□□□□□ -0.79
ATL3-204ENST00000540699 CMPK1P30085 196 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 EIF2S3P41091 472 aaKnown RBP10.11□□□□□ -0.79
ATL3-204ENST00000540699 CORO7P57737 925 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 ERVK-8P63133 956 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 EMX2Q04743 252 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 KCNAB1Q14722 419 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 GSTA3Q16772 222 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.11□□□□□ -0.79
ATL3-204ENST00000540699 CATSPEREQ5SY80 951 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 TMTC4Q5T4D3 741 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 DCAF12Q5T6F0 453 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 NXPE4Q6UWF7 544 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 CEACAM20Q6UY09 585 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 FAM129CQ86XR2 697 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 MYLK4Q86YV6 388 aaPredicted RBP10.11□□□□□ -0.79
ATL3-204ENST00000540699 LAS2Q8IYD9 372 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 SNIP1Q8TAD8 396 aaKnown RBP10.11□□□□□ -0.79
ATL3-204ENST00000540699 SELENOMQ8WWX9 145 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 PMEPA1Q969W9 287 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 PPP3R2Q96LZ3 170 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 ZNF285Q96NJ3 590 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 OR6C1Q96RD1 312 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 UBL7Q96S82 380 aaPredicted RBP10.11□□□□□ -0.79
ATL3-204ENST00000540699 EFCAB11Q9BUY7 163 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 BRINP2Q9C0B6 783 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 PELI2Q9HAT8 420 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 APMAPQ9HDC9 416 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 SDR39U1Q9NRG7 319 aaPredicted RBP10.11□□□□□ -0.79
ATL3-204ENST00000540699 THSD1Q9NS62 852 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 FGF21Q9NSA1 209 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 GEMIN8Q9NWZ8 242 aaKnown RBP10.11□□□□□ -0.79
ATL3-204ENST00000540699 SOHLH2Q9NX45 425 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 ASIC5Q9NY37 505 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 TAC3Q9UHF0 121 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 PILRAQ9UKJ1 303 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 RRP15Q9Y3B9 282 aaKnown RBP10.11□□□□□ -0.79
ATL3-204ENST00000540699 TSC22D4Q9Y3Q8 395 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 GPR45Q9Y5Y3 372 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 B3GALT1Q9Y5Z6 326 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 ASH1LQ9NR48 2969 aaKnown RBP10.1□□□□□ -0.79
ATL3-204ENST00000540699 POLR1CO15160 346 aaPredicted RBP10.1□□□□□ -0.79
ATL3-204ENST00000540699 MAP3K7O43318 606 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 HCRTR1O43613 425 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 PEX11AO75192 247 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 RSL1D1O76021 490 aaKnown RBP10.1□□□□□ -0.79
ATL3-204ENST00000540699 ESRRAP11474 423 aaPredicted RBP10.1□□□□□ -0.79
ATL3-204ENST00000540699 CDH1P12830 882 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 COX4I1P13073 169 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 HSD3B1P14060 373 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 HSD3B2P26439 372 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 PTPN4P29074 926 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 SLC5A2P31639 672 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 ARL4DP49703 201 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 MAPK10P53779 464 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 DIO3P55073 304 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 REEP5Q00765 189 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 HMGCS1Q01581 520 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 CSTF3Q12996 717 aaKnown RBP10.1□□□□□ -0.79
ATL3-204ENST00000540699 SLBPQ14493 270 aaKnown RBP eCLIP10.1□□□□□ -0.79
ATL3-204ENST00000540699 KIAA0040Q15053 153 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 NR6A1Q15406 480 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 ATP6AP1LQ52LC2 224 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 PDCD4Q53EL6 469 aaKnown RBP10.1□□□□□ -0.79
ATL3-204ENST00000540699 TMEM164Q5U3C3 297 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 RNF44Q7L0R7 432 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 PAQR7Q86WK9 346 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 C17orf64Q86WR6 236 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 ZFAND4Q86XD8 727 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 POU5F2Q8N7G0 328 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 LSM14AQ8ND56 463 aaKnown RBP10.1□□□□□ -0.79
ATL3-204ENST00000540699 ABHD11Q8NFV4 315 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 OR7G3Q8NG95 312 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 OR4K1Q8NGD4 311 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 RP9Q8TA86 221 aaKnown RBP10.1□□□□□ -0.79
ATL3-204ENST00000540699 CMTM5Q96DZ9 223 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 FCRL1Q96LA6 429 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 DPH7Q9BTV6 452 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 ACAT2Q9BWD1 397 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 KLHL25Q9H0H3 589 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 SPNS1Q9H2V7 528 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 ELOVL6Q9H5J4 265 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 PRORYQ9H606 182 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 MRPS30Q9NP92 439 aaKnown RBP10.1□□□□□ -0.79
ATL3-204ENST00000540699 FOXJ2Q9P0K8 574 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 SNX7Q9UNH6 387 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 KLHL20Q9Y2M5 609 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 TMEM184BQ9Y519 407 aaPredicted RBP10.1□□□□□ -0.79
ATL3-204ENST00000540699 PCDHGA11Q9Y5H2 935 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 TENM4Q6N022 2769 aa10.1□□□□□ -0.79
ATL3-204ENST00000540699 PSMD12O00232 456 aaPredicted RBP10.09□□□□□ -0.79
ATL3-204ENST00000540699 AGRPO00253 132 aa10.09□□□□□ -0.79
ATL3-204ENST00000540699 CTSVO60911 334 aa10.09□□□□□ -0.79
ATL3-204ENST00000540699 IDO1P14902 403 aa10.09□□□□□ -0.79
ATL3-204ENST00000540699 ACPPP15309 386 aa10.09□□□□□ -0.79
ATL3-204ENST00000540699 CPOXP36551 454 aa10.09□□□□□ -0.79
ATL3-204ENST00000540699 GCGRP47871 477 aa10.09□□□□□ -0.79
ATL3-204ENST00000540699 ZFP36L2P47974 494 aaKnown RBP10.09□□□□□ -0.79
ATL3-204ENST00000540699 CPA2P48052 419 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms