RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PSIP1O75475 530 aaKnown RBP11.8□□□□□ -0.52
NPC1-202ENST00000540608 ETFAP13804 333 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 SOX6P35712 828 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 CASP3P42574 277 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 DEFA1P59665 94 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 DEFA3P59666 94 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 RBBP4Q09028 425 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 NAE1Q13564 534 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 DEFB115Q30KQ5 88 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.8□□□□□ -0.52
NPC1-202ENST00000540608 AGTRAPQ6RW13 159 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 CCDC80Q76M96 950 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 KLHDC8AQ8IYD2 350 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 ZNF513Q8N8E2 541 aaPredicted RBP11.8□□□□□ -0.52
NPC1-202ENST00000540608 PXYLP1Q8TE99 480 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 CXorf40BQ96DE9 158 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 OR4K3Q96R72 315 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 MIR1-1HGQ9H1L0 117 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 B4GALT6Q9UBX8 382 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 ATP6V1HQ9UI12 483 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 EXO1Q9UQ84 846 aaKnown RBP11.8□□□□□ -0.52
NPC1-202ENST00000540608 LOC110117498-PIK3R3F6TDL0 507 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 KMOO15229 486 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 SH3BGRLO75368 114 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 AP2A2O94973 939 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 DNTTP04053 509 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 SOD2P04179 222 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 HSMCR30P0CW71 290 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 MAGP20916 626 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 HOXD10P28358 340 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 HMGA2P52926 109 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 CYP4F2P78329 520 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 GCNT6Q5T4J0 391 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 C1QTNF12Q5T7M4 302 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 ADNP2Q6IQ32 1131 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 ANGPTL8Q6UXH0 198 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 ZNF852Q6ZMS4 543 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 CCDC190Q86UF4 302 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 SLC7A5P1Q8MH63 180 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 CYP4Z2PQ8N1L4 340 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 CPXM2Q8N436 756 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 OR7G3Q8NG95 312 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 OR52N2Q8NGI0 321 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 HUS1BQ8NHY5 278 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 PIK3R3Q92569 461 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 MED8Q96G25 268 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 TCF25Q9BQ70 676 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 CFHR5Q9BXR6 569 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 ACER3Q9NUN7 267 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 EHD3Q9NZN3 535 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 STOX2Q9P2F5 926 aaPredicted RBP11.8□□□□□ -0.52
NPC1-202ENST00000540608 CAB39Q9Y376 341 aaPredicted RBP11.8□□□□□ -0.52
NPC1-202ENST00000540608 CFAP20Q9Y6A4 193 aaKnown RBP11.8□□□□□ -0.52
NPC1-202ENST00000540608 CXorf51AA0A1B0GTR3 108 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 GNG14A0A1W2PPG7 69 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 SH3D21A4FU49 640 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 EFCAB10A6NFE3 127 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 A8MU76 341 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 KIAA0513O60268 411 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 S100A1P23297 94 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 TIA1P31483 386 aaKnown RBP eCLIP11.79□□□□□ -0.52
NPC1-202ENST00000540608 PIK3CBP42338 1070 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 HBA1P69905 142 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 SCARB2Q14108 478 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 SF3B4Q15427 424 aaKnown RBP eCLIP11.79□□□□□ -0.524e-9■■■■■ 52.4
NPC1-202ENST00000540608 SPANXN2Q5MJ10 180 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 HTR3DQ70Z44 454 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 BBS7Q8IWZ6 715 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 TMEM38AQ9H6F2 299 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 SIAEQ9HAT2 523 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 IL21Q9HBE4 155 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 CNOT2Q9NZN8 540 aaKnown RBP11.79□□□□□ -0.52
NPC1-202ENST00000540608 HCN4Q9Y3Q4 1203 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 A0A1W2PQ67 120 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 POP4O95707 220 aaKnown RBP11.79□□□□□ -0.52
NPC1-202ENST00000540608 APOA1P02647 267 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 PTPN2P17706 415 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 LIMS1P48059 325 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 EPHB3P54753 998 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 CASP9P55211 416 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 FCHO2Q0JRZ9 810 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 PTGES3Q15185 160 aaKnown RBP11.79□□□□□ -0.52
NPC1-202ENST00000540608 NDUFA5Q16718 116 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 TIMM50Q3ZCQ8 353 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 ZNF385BQ569K4 471 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 C22orf39Q6P5X5 142 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 TMCO2Q7Z6W1 182 aaPredicted RBP11.79□□□□□ -0.52
NPC1-202ENST00000540608 IL17RDQ8NFM7 739 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 GPR156Q8NFN8 814 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 OR4K1Q8NGD4 311 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 OR9Q2Q8NGE9 314 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 NFKBIDQ8NI38 313 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 MGLLQ99685 303 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 PIP5K1AQ99755 562 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 MAPKAP1Q9BPZ7 522 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 SLC35A5Q9BS91 424 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 NUAK2Q9H093 628 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 REEP4Q9H6H4 257 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 ZDHHC6Q9H6R6 413 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms