RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SLC35A5Q9BS91 424 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 HTATIP2Q9BUP3 242 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 MTG2Q9H4K7 406 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 AIG1Q9NVV5 245 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 ZDHHC7Q9NXF8 308 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 FAM172BPA6NC97 362 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 OR1F1O43749 312 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 MITFO75030 526 aaPredicted RBP9.63□□□□□ -0.87
TRAF1-202ENST00000540010 ACRV1P26436 265 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 TLX1P31314 330 aaPredicted RBP9.63□□□□□ -0.87
TRAF1-202ENST00000540010 TUBA3CQ13748 450 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 DPY19L1Q2PZI1 675 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 AKIRIN2Q53H80 203 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 KIAA1614Q5VZ46 1190 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 KIAA1161Q6NSJ0 714 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 CHPFQ8IZ52 775 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 GPR26Q8NDV2 337 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 ISG20Q96AZ6 181 aaKnown RBP9.63□□□□□ -0.87
TRAF1-202ENST00000540010 TIFAQ96CG3 184 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 EID2BQ96D98 161 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 DPH2Q9BQC3 489 aaPredicted RBP9.63□□□□□ -0.87
TRAF1-202ENST00000540010 OR51B5Q9H339 312 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 ZCCHC3Q9NUD5 404 aaKnown RBP9.63□□□□□ -0.87
TRAF1-202ENST00000540010 NDOR1Q9UHB4 597 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 FBXW2Q9UKT8 454 aa9.63□□□□□ -0.87
TRAF1-202ENST00000540010 ARHGEF33A8MVX0 844 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 CPNE3O75131 537 aaKnown RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 LEFTY1O75610 366 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 TSPAN9O75954 239 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 STATHP02808 62 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 RLN1P04808 185 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 C8GP07360 202 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 BMP2P12643 396 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 DHCR24Q15392 516 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 OR10G6Q8NH81 332 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 PIK3R3Q92569 461 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 LHPPQ9H008 270 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 CCDC177Q9NQR7 707 aaPredicted RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 FAM118AQ9NWS6 357 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 RIMS3Q9UJD0 308 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 STX16O14662 325 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 HCN1O60741 890 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 OR6A2O95222 327 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 BMP1P13497 986 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 PTNP21246 168 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 HTR1EP28566 365 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 CD47Q08722 323 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 GNA13Q14344 377 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 RFTN2Q52LD8 501 aaPredicted RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 LCN1P1Q5VSP4 162 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 BICRALQ6AI39 1079 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 SYCE2Q6PIF2 218 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 RTL10Q7L3V2 364 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 COMMD2Q86X83 199 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 SNX29P2Q8IUI4 249 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 ADGRG2Q8IZP9 1017 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 MEIOBQ8N635 442 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 ANKRD60Q9BZ19 345 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 MED28Q9H204 178 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 TRIT1Q9H3H1 467 aaKnown RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 ANKRA2Q9H9E1 313 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 TNFRSF12AQ9NP84 129 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 DNAJC27Q9NZQ0 273 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 DEC1Q9P2X7 70 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 DKK3Q9UBP4 350 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF282Q9UDV7 671 aaPredicted RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF780BQ9Y6R6 833 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 NUP214P35658 2090 aaPredicted RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 TRBC2A0A5B9 178 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 H0YAE9 185 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 H3BMQ9 156 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 GFRA2O00451 464 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 UBFD1O14562 309 aaKnown RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 TLX2O43763 284 aaPredicted RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 KLK1P06870 262 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 LAMP2P13473 410 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 RORCP51449 518 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 TIAL1Q01085 375 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 GALNT1Q10472 559 aaPredicted RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 ST3GAL4Q11206 333 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 SLBPQ14493 270 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF77Q15935 545 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 ATP13A5Q4VNC0 1218 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 BRAT1Q6PJG6 821 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 VTCN1Q7Z7D3 282 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 ZSWIM9Q86XI8 627 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 COG8Q96MW5 612 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 NAA50Q9GZZ1 169 aaKnown RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 PAK1IP1Q9NWT1 392 aaPredicted RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 ZDHHC3Q9NYG2 299 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 OR10H1Q9Y4A9 318 aa9.62□□□□□ -0.87
TRAF1-202ENST00000540010 CFAP20Q9Y6A4 193 aaKnown RBP9.62□□□□□ -0.87
TRAF1-202ENST00000540010 MKI67P46013 3256 aaKnown RBP9.61□□□□□ -0.87
TRAF1-202ENST00000540010 PCP4L1A6NKN8 68 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 KHDRBS3O75525 346 aaKnown RBP9.61□□□□□ -0.87
TRAF1-202ENST00000540010 BCKDHAP12694 445 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 MTHFD2P13995 350 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 HOXA9P31269 272 aa9.61□□□□□ -0.87
TRAF1-202ENST00000540010 RPP38P78345 283 aaKnown RBP9.61□□□□□ -0.87
TRAF1-202ENST00000540010 CDK6Q00534 326 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms