RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 NRROSQ86YC3 692 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF101Q8IZC7 436 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 TPT1P8Q9HAU6 139 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 HCN4Q9Y3Q4 1203 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 A0A096LPI6 279 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 COCHO43405 550 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 EPCAMP16422 314 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ATF6P18850 670 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 SLC6A9P48067 706 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 OR2B6P58173 313 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ELOCQ15369 112 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 CYBRD1Q53TN4 286 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 TMEM198Q66K66 360 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 PAQR7Q86WK9 346 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF317Q96PQ6 595 aaPredicted RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 PRDM4Q9UKN5 801 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 CFAP20Q9Y6A4 193 aaKnown RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 A8MU76 341 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF878C9JN71 531 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 TSPAN6O43657 245 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 MTX2O75431 263 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ITGA5P08648 1049 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 XRCC1P18887 633 aaPredicted RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 OGDHQ02218 1023 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 KCNC4Q03721 635 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF598Q86UK7 904 aaKnown RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 GALNT15Q8N3T1 639 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 SLC44A3Q8N4M1 653 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 IMP4Q96G21 291 aaKnown RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 PEBP4Q96S96 227 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 CHIAQ9BZP6 476 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 KCNH6Q9H252 994 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 EBF2Q9HAK2 575 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 C14orf166Q9Y224 244 aaKnown RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 CACNA1SQ13698 1873 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 B4GALT2O60909 372 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 AHSA1O95433 338 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 MT-ND5P03915 603 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 DLDP09622 509 aaKnown RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 HNRNPA1P09651 372 aaKnown RBP eCLIP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 DUSP3P51452 185 aaPredicted RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 CLRN1P58418 232 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 MLIPQ5VWP3 458 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 CITED4Q96RK1 184 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 RAD9AQ99638 391 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 MVB12BQ9H7P6 319 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ASB6Q9NWX5 421 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 M0QX08 132 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ABCB7O75027 752 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 BCAS2O75934 225 aaPredicted RBP6.26□□□□□ -1.41
LSAMP-207ENST00000539563 SNAI1O95863 264 aaPredicted RBP6.26□□□□□ -1.41
LSAMP-207ENST00000539563 C6orf47O95873 294 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 HOXD13P35453 343 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 DSG2Q14126 1118 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 TSTQ16762 297 aaKnown RBP6.26□□□□□ -1.41
LSAMP-207ENST00000539563 GXYLT1Q4G148 440 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 KLHDC10Q6PID8 442 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ERMP1Q7Z2K6 904 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 GLYATL1Q969I3 302 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ARHGAP39Q9C0H5 1083 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 MARCH7Q9H992 704 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ALG5Q9Y673 324 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ADAMTS3O15072 1205 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 KCNJ13O60928 360 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 GALTP07902 379 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 MAZP56270 477 aaKnown RBP6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ADAM17P78536 824 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ARL9Q6T311 187 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ERN2Q76MJ5 926 aaKnown RBP6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ZSWIM9Q86XI8 627 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 BIRC7Q96CA5 298 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 SLC2A13Q96QE2 648 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 IL4I1Q96RQ9 567 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 SPHK2Q9NRA0 654 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 KLF15Q9UIH9 416 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 SIX4Q9UIU6 781 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 OR2AT4A6NND4 320 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 PDLIM1O00151 329 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 PPM1BO75688 479 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 TRAPPC6AO75865 159 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 AZGP1P25311 298 aaKnown RBP6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ARPC4P59998 168 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 CLCA4Q14CN2 919 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 LY6G5CQ5SRR4 150 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 CPNE8Q86YQ8 564 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 TAMM41Q96BW9 452 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 TMLHEQ9NVH6 421 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF224Q9NZL3 707 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 GNG8Q9UK08 70 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 LIPT1Q9Y234 373 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 NPC1O15118 1278 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 TBX10O75333 385 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 APBB3O95704 486 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 HLA-DPB1P04440 258 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 C1GALT1C1LP0DN25 315 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 RPL10P27635 214 aaKnown RBP6.26□□□□□ -1.41
LSAMP-207ENST00000539563 HTR1EP28566 365 aa6.26□□□□□ -1.41
LSAMP-207ENST00000539563 POU6F2P78424 691 aaPredicted RBP6.26□□□□□ -1.41
LSAMP-207ENST00000539563 LASP1Q14847 261 aaKnown RBP6.26□□□□□ -1.41
LSAMP-207ENST00000539563 WSCD2Q2TBF2 565 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms