RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 NAALAD2Q9Y3Q0 740 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 SAMHD1Q9Y3Z3 626 aaKnown RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 HEMK1Q9Y5R4 338 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 CFAP20Q9Y6A4 193 aaKnown RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 SLC1A7O00341 560 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 SUV39H1O43463 412 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 JRKO75564 520 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 IL3P08700 152 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 AQP1P29972 269 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 CRATP43155 626 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 ARHGDIAP52565 204 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 GTF2IRD2BQ6EKJ0 949 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 DHRS4L2Q6PKH6 230 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 IKBIPQ70UQ0 350 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 GTF2IRD2Q86UP8 949 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 C17orf64Q86WR6 236 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 HORMAD1Q86X24 394 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 ZNF566Q969W8 418 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 DOHHQ9BU89 302 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 SORBS1Q9BX66 1292 aaKnown RBP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 PELI2Q9HAT8 420 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 WASH6PQ9NQA3 447 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 C1GALT1Q9NS00 363 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 EXD2Q9NVH0 621 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 DZANK1Q9NVP4 752 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 PAK1IP1Q9NWT1 392 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 ADPRHL2Q9NX46 363 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 PDP1Q9P0J1 537 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 TAC3Q9UHF0 121 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 BAG5Q9UL15 447 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 BLOC1S6Q9UL45 172 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 RANBP2P49792 3224 aaKnown RBP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 A0A1W2PPV9 198 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 E9PQ18 207 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 PLPP1O14494 284 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 UGT2B11O75310 529 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 PCDH8O95206 1070 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 MATN1P21941 496 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 WASP42768 502 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 CLK3P49761 638 aaKnown RBP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 CASP9P55211 416 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 SELENOWP63302 87 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 EEF1A2Q05639 463 aaKnown RBP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 FADDQ13158 208 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 CDK5R2Q13319 367 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 TOP3AQ13472 1001 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 KEAP1Q14145 624 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 FAHD1Q6P587 224 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 MMP21Q8N119 569 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 ANKRD53Q8N9V6 530 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 ABHD11Q8NFV4 315 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 OCEL1Q9H607 264 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 TMEM38AQ9H6F2 299 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 CUEDC1Q9NWM3 386 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 THUMPD1Q9NXG2 353 aaKnown RBP13.41□□□□□ -0.26
LIMK1-208ENST00000538333 TAS2R9Q9NYW1 312 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 TMEM9Q9P0T7 183 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 TAAR2Q9P1P5 351 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 ACSL6Q9UKU0 697 aa13.41□□□□□ -0.26
LIMK1-208ENST00000538333 TMX2-CTNND1H3BSU7 103 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 M0QX08 132 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 SEMA3DO95025 777 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 RPN2P04844 631 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 CCDC159P0C7I6 412 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 TRIM23P36406 574 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 HSD17B2P37059 387 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 PBX2P40425 430 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 RPS6KA3P51812 740 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 RBBP4Q09028 425 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 FGL2Q14314 439 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 SLC5A12Q1EHB4 618 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 FAM124AQ86V42 546 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 GAB3Q8WWW8 586 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 EPYCQ99645 322 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 MS4A8Q9BY19 250 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 SLC6A16Q9GZN6 736 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 REEP1Q9H902 201 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 SPASTQ9UBP0 616 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 ICKQ9UPZ9 632 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 OR1A2Q9Y585 309 aa13.4□□□□□ -0.26
LIMK1-208ENST00000538333 GPR89AB7ZAQ6 455 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 KMOO15229 486 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 C9P02748 559 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 FUCA1P04066 466 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 GPR89BP0CG08 455 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 PSMB5P28074 263 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 TEAD1P28347 426 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 NUP107P57740 925 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 TUBA3CQ13748 450 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 SIM2Q14190 667 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-208ENST00000538333 IRF4Q15306 451 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 GCNT6Q5T4J0 391 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 DEPDC1Q5TB30 811 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 KHDRBS2Q5VWX1 349 aaKnown RBP13.39□□□□□ -0.27
LIMK1-208ENST00000538333 ANGPTL8Q6UXH0 198 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 ADGRF3Q8IZF5 1079 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 CNIH3Q8TBE1 160 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 LHPPQ9H008 270 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms