RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 SP140Q13342 867 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 TSTA3Q13630 321 aaPredicted RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 FASTKD3Q14CZ7 662 aaKnown RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 PRTGQ2VWP7 1150 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 TEDDM1Q5T9Z0 273 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 ICE2Q659A1 982 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 FRMPD2BQ6IN97 320 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 ZNF425Q6IV72 752 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 TRMT10BQ6PF06 316 aaKnown RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 ASB18Q6ZVZ8 466 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 UBE2R2Q712K3 238 aaPredicted RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 MED25Q71SY5 747 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 COX15Q7KZN9 410 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 MYO1HQ8N1T3 1032 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 LINGO1Q96FE5 620 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 C10orf90Q96M02 699 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 KRT12Q99456 494 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 SLC25A23Q9BV35 468 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 TRIM31Q9BZY9 425 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 SLC26A1Q9H2B4 701 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 WDR54Q9H977 334 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 MLXIPLQ9NP71 852 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 ACSS2Q9NR19 701 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 GFOD1Q9NXC2 390 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 TAC3Q9UHF0 121 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 NXT1Q9UKK6 140 aaKnown RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.7□□□□□ -1.34
YBX3-206ENST00000536823 NUP210LQ5VU65 1888 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 SHANK1Q9Y566 2161 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 DOPEY1Q5JWR5 2465 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 LOC105369274A0A096LPK9 316 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 LOC102723532A0A0G2JNH3 316 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 A0A0J9YVX5 310 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 H0YGG7 62 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 HAT1O14929 419 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 SLC16A5O15375 505 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 RAD51CO43502 376 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 TSPAN12O95859 305 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 FSHBP01225 129 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 IGHEP01854 428 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 FDXRP22570 491 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 MMP11P24347 488 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 CSRP3P50461 194 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 CCL11P51671 97 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 FOXL2P58012 376 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 ARF3P61204 181 aaPredicted RBP6.69□□□□□ -1.34
YBX3-206ENST00000536823 TBPL1P62380 186 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 PPP2R2AP63151 447 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 RELAQ04206 551 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 MGAT5Q09328 741 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 PDIA2Q13087 525 aaKnown RBP6.69□□□□□ -1.34
YBX3-206ENST00000536823 MUM1Q2TAK8 710 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 FAM214AQ32MH5 1076 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 WASHC2DQ5SRD0 308 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 THEMIS2Q5TEJ8 643 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 HECTD2Q5U5R9 776 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 FAM45BPQ6NSW5 357 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 PRMT9Q6P2P2 845 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 PAQR3Q6TCH7 311 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 MBOAT1Q6ZNC8 495 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 OVCH1Q7RTY7 1134 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 PPP1R32Q7Z5V6 425 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 OR4N4Q8N0Y3 316 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 C17orf53Q8N3J3 647 aaPredicted RBP6.69□□□□□ -1.34
YBX3-206ENST00000536823 CSNK1A1LQ8N752 337 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 GPATCH11Q8N954 259 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 TEX19Q8NA77 164 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 PPFIBP2Q8ND30 876 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 FBXO36Q8NEA4 188 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 SPATA4Q8NEY3 305 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 FAM45AQ8TCE6 357 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 MCOLN3Q8TDD5 553 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 EEF1AKMT1Q8WVE0 214 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.69□□□□□ -1.34
YBX3-206ENST00000536823 CLMPQ9H6B4 373 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 SYNPO2LQ9H987 977 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 PARVBQ9HBI1 364 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 PPANQ9NQ55 473 aaKnown RBP6.69□□□□□ -1.34
YBX3-206ENST00000536823 CCDC177Q9NQR7 707 aaPredicted RBP6.69□□□□□ -1.34
YBX3-206ENST00000536823 P4HTMQ9NXG6 502 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 UTP6Q9NYH9 597 aaKnown RBP6.69□□□□□ -1.34
YBX3-206ENST00000536823 STOX2Q9P2F5 926 aaPredicted RBP6.69□□□□□ -1.34
YBX3-206ENST00000536823 CTSFQ9UBX1 484 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 G3BP2Q9UN86 482 aaKnown RBP6.69□□□□□ -1.34
YBX3-206ENST00000536823 PDE10AQ9Y233 779 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 SNX24Q9Y343 169 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 SF3B6Q9Y3B4 125 aaKnown RBP6.69□□□□□ -1.34
YBX3-206ENST00000536823 PSAT1Q9Y617 370 aa6.69□□□□□ -1.34
YBX3-206ENST00000536823 NOTCH2Q04721 2471 aa6.68□□□□□ -1.34
YBX3-206ENST00000536823 HYKKA2RU49 373 aa6.68□□□□□ -1.34
YBX3-206ENST00000536823 VSTM2BA6NLU5 285 aa6.68□□□□□ -1.34
YBX3-206ENST00000536823 PEX12O00623 359 aa6.68□□□□□ -1.34
YBX3-206ENST00000536823 EIF3HO15372 352 aaKnown RBP eCLIP6.68□□□□□ -1.34
YBX3-206ENST00000536823 P2RX6O15547 441 aa6.68□□□□□ -1.34
YBX3-206ENST00000536823 EIF2S1P05198 315 aaKnown RBP6.68□□□□□ -1.34
YBX3-206ENST00000536823 GSNP06396 782 aa6.68□□□□□ -1.34
YBX3-206ENST00000536823 FAM153BP0C7A2 387 aa6.68□□□□□ -1.34
YBX3-206ENST00000536823 FBLP22087 321 aaKnown RBP6.68□□□□□ -1.34
YBX3-206ENST00000536823 CCND1P24385 295 aa6.68□□□□□ -1.34
YBX3-206ENST00000536823 HRH2P25021 359 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms