RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 IGHEP01854 428 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 SERPINB1P30740 379 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 XCR1P46094 333 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 EMP2P54851 167 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 CDH13P55290 713 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 SKP1P63208 163 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 ZNF844Q08AG5 666 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 CHAF1BQ13112 559 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 KIRREL2Q6UWL6 708 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 ZYG11AQ6WRX3 759 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 IQCKQ8N0W5 287 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 SLC39A7Q92504 469 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 QRFPRQ96P65 431 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 CDK15Q96Q40 435 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 F2RL3Q96RI0 385 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 MESP1Q9BRJ9 268 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 MS4A8Q9BY19 250 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 SEMA4CQ9C0C4 833 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 REXO4Q9GZR2 422 aaKnown RBP21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 C12orf65Q9H3J6 166 aaKnown RBP21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 CLK4Q9HAZ1 481 aaKnown RBP21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 SEMA4BQ9NPR2 832 aaPredicted RBP21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 ACSS2Q9NR19 701 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 MKS1Q9NXB0 559 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 GRID1Q9ULK0 1009 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 PCDHGA11Q9Y5H2 935 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 A0A0G2JN53 185 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 IDSB3KWA1 339 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 G3V2L1 256 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 PEX12O00623 359 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 PPP6CO00743 305 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 CHST10O43529 356 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 DNAJB5O75953 348 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 CLDN9O95484 217 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 IMPDH1P20839 514 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 CCNG1P51959 295 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 OLR1P78380 273 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 BTN3A2P78410 334 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 RBBP7Q16576 425 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 CPSF6Q16630 551 aaKnown RBP eCLIP21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 CCDC153Q494R4 210 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 ABHD17CQ6PCB6 329 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 MED25Q71SY5 747 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 SLC22A9Q8IVM8 553 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 RNF175Q8N4F7 328 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 TMEM102Q8N9M5 508 aaPredicted RBP21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 OR2L5Q8NG80 312 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 HUS1BQ8NHY5 278 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 ATP6V1E2Q96A05 226 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 PEX11GQ96HA9 241 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 ADNPQ9H2P0 1102 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 RRAGDQ9NQL2 400 aaPredicted RBP21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 ADGRE2Q9UHX3 823 aa21.47■■□□□ 1.03
SFSWAP-204ENST00000535399 SMG1Q96Q15 3661 aaKnown RBP21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 A0A1B0GTL3 188 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 AGPSO00116 658 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 HEXBP07686 556 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 TSPAN8P19075 237 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 HPDP32754 393 aaPredicted RBP21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 PIK3CBP42338 1070 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 PLA2G16P53816 162 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 CLCQ05315 142 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 KCNAB2Q13303 367 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 ZRSR2Q15696 482 aaKnown RBP21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 UBE3DQ7Z6J8 389 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 SRRM1Q8IYB3 904 aaKnown RBP21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 BANPQ8N9N5 519 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 WDR20Q8TBZ3 569 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 L3HYPDHQ96EM0 354 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 VN1R1Q9GZP7 353 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 DMRT3Q9NQL9 472 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 TUBD1Q9UJT1 453 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 FBXL4Q9UKA2 621 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 MKL2Q9ULH7 1088 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 CCDC88CQ9P219 2028 aa21.46■■□□□ 1.03
SFSWAP-204ENST00000535399 SUPT7LO94864 414 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 OTCP00480 354 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 TGFB1P01137 390 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 MYL2P10916 166 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 IL10P22301 178 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 DDX39BQ13838 428 aaKnown RBP21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 RUNX2Q13950 521 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 KRT71Q3SY84 523 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 GGTA1PQ4G0N0 100 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 TMEM35AQ53FP2 167 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 DCAF10Q5QP82 559 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 LETMD1Q6P1Q0 360 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 TRIM40Q6P9F5 258 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 MILR1Q7Z6M3 343 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 OR4F6Q8NGB9 312 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 OR11G2Q8NGC1 345 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 TRPC4APQ8TEL6 797 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 REPS1Q96D71 796 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 CMTM7Q96FZ5 175 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 APOPT1Q96IL0 206 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 FAR2Q96K12 515 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 FER1L6-AS2Q96M78 137 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 OR1F2PQ96R84 312 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 RBCK1Q9BYM8 510 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 LANCL2Q9NS86 450 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms