RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 C2P06681 752 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 ITGAMP11215 1152 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 GNLYP22749 145 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 JAK1P23458 1154 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 ECHS1P30084 290 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 UQCRFS1P47985 274 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 GLRBP48167 497 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 IRF9Q00978 393 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 ABRAXAS2Q15018 415 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 NSDHLQ15738 373 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 XKR6Q5GH73 641 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 PRAMEF9Q5VWM5 478 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 CENPLQ8N0S6 344 aaPredicted RBP28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 AMER2Q8N7J2 671 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 KCTD4Q8WVF5 259 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 WDR34Q96EX3 536 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 PTCD3Q96EY7 689 aaKnown RBP28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 CNDP1Q96KN2 507 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 MAGEB17A8MXT2 336 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 C4orf51C9J302 202 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 UBXN8O00124 270 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 ACSL3O95573 720 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 UQCRHP07919 91 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 DOC2AQ14183 400 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 FAM83EQ2M2I3 478 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 LRRC70Q7Z2Q7 622 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 CCT6BQ92526 530 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 EFCAB11Q9BUY7 163 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 SLC29A3Q9BZD2 475 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 ASF1BQ9NVP2 202 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 ASB1Q9Y576 335 aa28.52■■■□□ 2.16
SSSCA1-207ENST00000533115 CLEC18AA5D8T8 446 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 ANKDD1BA6NHY2 528 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 CLEC3AO75596 197 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 EPORP19235 508 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 UBAP2LQ14157 1087 aaKnown RBP28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 ZNF169Q14929 603 aaPredicted RBP28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 TLR1Q15399 786 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 PLAG1Q6DJT9 500 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 CLEC18BQ6UXF7 455 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 CEP112Q8N8E3 955 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 CLEC18CQ8NCF0 446 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 RHEBL1Q8TAI7 183 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 TSLPQ969D9 159 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 GAL3ST3Q96A11 431 aa28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 ZNF490Q9ULM2 529 aaPredicted RBP28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 COPG1Q9Y678 874 aaKnown RBP28.51■■■□□ 2.15
SSSCA1-207ENST00000533115 A0A096LPK6 155 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 LRIT2A6NDA9 550 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 TCP11X1B4DZS4 312 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 B4GALT2O60909 372 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 RNH1P13489 461 aaKnown RBP28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 TYK2P29597 1187 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 HNRNPH1P31943 449 aaKnown RBP28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 SERPINB8P50452 374 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 ARG2P78540 354 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 LAPTM5Q13571 262 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 BTBD16Q32M84 506 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 SFT2D3Q587I9 215 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 B3GNTL1Q67FW5 361 aaPredicted RBP28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 UBTD2Q8WUN7 234 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 MS4A6EQ96DS6 147 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 TRIM44Q96DX7 344 aaPredicted RBP28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 FAR2Q96K12 515 aa28.5■■■□□ 2.15
SSSCA1-207ENST00000533115 CCDC189A1A4V9 331 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 DYTNA2CJ06 578 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 SYCE1LA8MT33 242 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 ALDOAP04075 364 aaKnown RBP28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 CD22P20273 847 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 TSFMP43897 325 aaKnown RBP28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 BTN3A2P78410 334 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 IRF8Q02556 426 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 SRSF1Q07955 248 aaKnown RBP eCLIP28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 ACTN3Q08043 901 aaPredicted RBP28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 CHIT1Q13231 466 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 ACAP2Q15057 778 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 TBCCQ15814 346 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 PAGE2BQ5JRK9 111 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 VN1R5Q7Z5H4 357 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 CA13Q8N1Q1 262 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 CATSPER1Q8NEC5 780 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 SLC44A1Q8WWI5 657 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 PLA2G3Q9NZ20 509 aa28.49■■■□□ 2.15
SSSCA1-207ENST00000533115 SCN2AQ99250 2005 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 LRRK2Q5S007 2527 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 K7EPI3 171 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 PSMD12O00232 456 aaPredicted RBP28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 ERI3O43414 337 aaKnown RBP28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 KLHL2O95198 593 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 TBX6O95947 436 aaPredicted RBP28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 MTHFD2P13995 350 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 HPDP32754 393 aaPredicted RBP28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 CASP2P42575 452 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 OR4D2P58180 307 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 EXT1Q16394 746 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 HIST2H2ACQ16777 129 aaPredicted RBP28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 HIST2H2AA3Q6FI13 130 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 PAPD4Q6PIY7 484 aaKnown RBP28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 QSOX2Q6ZRP7 698 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 FAM26EQ8N5C1 309 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms