RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 PPP1R14CQ8TAE6 165 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 ZCCHC10Q8TBK6 192 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 MCOLN3Q8TDD5 553 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 ASZ1Q8WWH4 475 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 SMPDL3BQ92485 455 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 SARAFQ96BY9 339 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 HAUS1Q96CS2 278 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 CNPPD1Q9BV87 410 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 UVRAGQ9P2Y5 699 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 SPRR3Q9UBC9 169 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 LCMT1Q9UIC8 334 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 TRHDEQ9UKU6 1024 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 ACAD8Q9UKU7 415 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 TRBV11-1A0A0K0K1C0 115 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 FEZF1A0PJY2 475 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 ZNF860A6NHJ4 632 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 IQCF5A8MTL0 148 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 F8W8V4 182 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 G3V3Y1 287 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 CES2O00748 559 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 EREGO14944 169 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 DNAJB6O75190 326 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 ITGA10O75578 1167 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 SMNDC1O75940 238 aaKnown RBP eCLIP7.62□□□□□ -1.19
CD44-232ENST00000531118 CCNDBP1O95273 360 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 APOA4P06727 396 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 ERGP11308 486 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 RPA3P35244 121 aaPredicted RBP7.62□□□□□ -1.19
CD44-232ENST00000531118 WNT3P56703 355 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 MPP1Q00013 466 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 TYSND1Q2T9J0 566 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 NDUFAF5Q5TEU4 345 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 ICE2Q659A1 982 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 KIAA0930Q6ICG6 404 aaPredicted RBP7.62□□□□□ -1.19
CD44-232ENST00000531118 POMZP3Q6PJE2 187 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 SUSD1Q6UWL2 747 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 MFSD7Q6UXD7 560 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 GK5Q6ZS86 529 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 VN1R4Q7Z5H5 301 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 ADCK2Q7Z695 626 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 PDSS2Q86YH6 399 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 TNIP2Q8NFZ5 429 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 KIAA1191Q96A73 305 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 PEX11GQ96HA9 241 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 CDKN2AIPNLQ96HQ2 116 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 OR1F2PQ96R84 312 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 TSSK1BQ9BXA7 367 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 DEFB126Q9BYW3 111 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 NUP62CLQ9H1M0 184 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 KCMF1Q9P0J7 381 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 TAC3Q9UHF0 121 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 FEZ2Q9UHY8 353 aaPredicted RBP7.62□□□□□ -1.19
CD44-232ENST00000531118 R3HDM2Q9Y2K5 976 aaKnown RBP7.62□□□□□ -1.19
CD44-232ENST00000531118 MRFAP1Q9Y605 127 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 DUSP10Q9Y6W6 482 aa7.62□□□□□ -1.19
CD44-232ENST00000531118 MGAM2Q2M2H8 2515 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 A0A087X0T9 212 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 A8MVJ9 347 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 KDM4EB2RXH2 506 aaPredicted RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 EEF1E1-BLOC1S5C9J1V9 151 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 EEF1E1O43324 174 aaKnown RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 SUSD5O60279 629 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 CST8O60676 142 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 FHP07954 510 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 FAM228BP0C875 321 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 PKMP14618 531 aaKnown RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 AOAHP28039 575 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 CEACAM8P31997 349 aaPredicted RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 CCNFP41002 786 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 CDKN2BP42772 138 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 PTH2RP49190 550 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 SSR4P51571 173 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 ZNF136P52737 540 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 MYL5Q02045 173 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 TSTA3Q13630 321 aaPredicted RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 TRIM14Q14142 442 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 TFDP2Q14188 446 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 SPARCL1Q14515 664 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 POU6F1Q14863 301 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 ACSF3Q4G176 576 aaPredicted RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 C10orf62Q5T681 223 aaPredicted RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 MAATS1Q7Z4T9 603 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 KRT222Q8N1A0 295 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 FBXW8Q8N3Y1 598 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 APCDD1LQ8NCL9 501 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 NFAM1Q8NET5 270 aaPredicted RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 STYXQ8WUJ0 223 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 SKA2Q8WVK7 121 aaPredicted RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 SMPDL3AQ92484 453 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 SYN2Q92777 582 aaPredicted RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 DACH2Q96NX9 599 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 HSD3B7Q9H2F3 369 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 UBTD1Q9HAC8 227 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 ARNT2Q9HBZ2 717 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 ANKHQ9HCJ1 492 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 HPF1Q9NWY4 346 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 ALKBH4Q9NXW9 302 aa7.61□□□□□ -1.19
CD44-232ENST00000531118 UTP6Q9NYH9 597 aaKnown RBP7.61□□□□□ -1.19
CD44-232ENST00000531118 TTC7AQ9ULT0 858 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms