RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 OR4C11Q6IEV9 310 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 CNSTQ6PJW8 725 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 SH2D5Q6ZV89 423 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 ERC1Q8IUD2 1116 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 ZC3H3Q8IXZ2 948 aaKnown RBP4□□□□□ -1.77
C11orf88-204ENST00000529661 NIPA2Q8N8Q9 360 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 GGHQ92820 318 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 TBC1D31Q96DN5 1066 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 TMEM237Q96Q45 408 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 TSPAN18Q96SJ8 248 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 NKX3-1Q99801 234 aaPredicted RBP4□□□□□ -1.77
C11orf88-204ENST00000529661 SPXQ9BT56 116 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 TNMDQ9H2S6 317 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF71Q9NQZ8 489 aaPredicted RBP4□□□□□ -1.77
C11orf88-204ENST00000529661 PRMT8Q9NR22 394 aaPredicted RBP4□□□□□ -1.77
C11orf88-204ENST00000529661 MAN2C1Q9NTJ4 1040 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 STAU2Q9NUL3 570 aaKnown RBP eCLIP4□□□□□ -1.77
C11orf88-204ENST00000529661 FETUBQ9UGM5 382 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 EXOC6BQ9Y2D4 811 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 NSG2Q9Y328 171 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 TMED7Q9Y3B3 224 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 NPHP3Q7Z494 1330 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 STK36Q9NRP7 1315 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 A0A087WUV0 522 aaPredicted RBP3.99□□□□□ -1.77
C11orf88-204ENST00000529661 SAP30O75446 220 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 MMP10P09238 476 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 GNB3P16520 340 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 CYP3A5P20815 502 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 OR3A2P47893 321 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 SP3Q02447 781 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 SLC3A1Q07837 685 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 TRA2AQ13595 282 aaKnown RBP eCLIP3.99□□□□□ -1.77
C11orf88-204ENST00000529661 DUSP5Q16690 384 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 PARP10Q53GL7 1025 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 ETFRF1Q6IPR1 90 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 SLC24A5Q71RS6 500 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 HSCBQ8IWL3 235 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 LSMEM2Q8N112 164 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 FBXW8Q8N3Y1 598 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 ARL6IP6Q8N6S5 226 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 SIDT2Q8NBJ9 832 aaKnown RBP3.99□□□□□ -1.77
C11orf88-204ENST00000529661 OR10G8Q8NGN5 311 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 CD99L2Q8TCZ2 262 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 GATAD1Q8WUU5 269 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 TMEM190Q8WZ59 177 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 SUSD6Q92537 303 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 RFT1Q96AA3 541 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 NAP1L3Q99457 506 aaPredicted RBP3.99□□□□□ -1.77
C11orf88-204ENST00000529661 TRIM10Q9UDY6 481 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 TMCC3Q9ULS5 477 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 NCKAP1Q9Y2A7 1128 aa3.99□□□□□ -1.77
C11orf88-204ENST00000529661 RPH3AQ9Y2J0 694 aaPredicted RBP3.99□□□□□ -1.77
C11orf88-204ENST00000529661 IGKV3D-15A0A087WSY6 115 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 TRBV4-1A0A0J9YWV2 114 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 SYCE3A1L190 88 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 A8MVM7 634 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF732B4DXR9 585 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 CYTIPO60759 359 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 CLN5O75503 358 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 CDC123O75794 336 aaPredicted RBP3.98□□□□□ -1.77
C11orf88-204ENST00000529661 SEC24AO95486 1093 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 CXCL14O95715 111 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 TBX6O95947 436 aaPredicted RBP3.98□□□□□ -1.77
C11orf88-204ENST00000529661 CEBPBP17676 345 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 LEPRP48357 1165 aaKnown RBP3.98□□□□□ -1.77
C11orf88-204ENST00000529661 CASP9P55211 416 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 DCDC1P59894 354 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 CSNK2BP67870 215 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 IL1RL1Q01638 556 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 TSTA3Q13630 321 aaPredicted RBP3.98□□□□□ -1.77
C11orf88-204ENST00000529661 CDH18Q13634 790 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 GK2Q14410 553 aaPredicted RBP3.98□□□□□ -1.77
C11orf88-204ENST00000529661 FGD3Q5JSP0 725 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 FFAR4Q5NUL3 377 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 SLC27A4Q6P1M0 643 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 CD164L2Q6UWJ8 174 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 C15orf52Q6ZUT6 534 aaKnown RBP3.98□□□□□ -1.77
C11orf88-204ENST00000529661 TOM1L2Q6ZVM7 507 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 BTN2A1Q7KYR7 527 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 THEM5Q8N1Q8 247 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 DCLK2Q8N568 766 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF485Q8NCK3 441 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 OR5AP2Q8NGF4 316 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 HCAR2Q8TDS4 363 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 SEPT8Q92599 483 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF560Q96MR9 790 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 GUCD1Q96NT3 240 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 NECTIN4Q96NY8 510 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 DDX50Q9BQ39 737 aaKnown RBP3.98□□□□□ -1.77
C11orf88-204ENST00000529661 EGLN1Q9GZT9 426 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 KCNMB3Q9NPA1 279 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 C2orf42Q9NWW7 574 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 HACD3Q9P035 362 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 TRMT6Q9UJA5 497 aaKnown RBP3.98□□□□□ -1.77
C11orf88-204ENST00000529661 SATB2Q9UPW6 733 aa3.98□□□□□ -1.77
C11orf88-204ENST00000529661 IGHV4-4A0A075B6R2 117 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 SERINC4A6NH21 518 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 MLNRO43193 412 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 TRMUO75648 421 aaKnown RBP3.97□□□□□ -1.77
C11orf88-204ENST00000529661 IGLV1-44P01699 117 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms