RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SYNDIG1LA6NDD5 238 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 CDC7O00311 574 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 MLYCDO95822 493 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 CLDN1O95832 211 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 SERPIND1P05546 499 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 GSTA2P09210 222 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 SMIM10L1P0DMW3 83 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 SAT1P21673 171 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 RPL21P46778 160 aaKnown RBP13.35□□□□□ -0.27
CAPN1-212ENST00000527887 TDGF1P3P51864 188 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 OR4D2P58180 307 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 STXBP1P61764 594 aaKnown RBP13.35□□□□□ -0.27
CAPN1-212ENST00000527887 USP10Q14694 798 aaKnown RBP13.35□□□□□ -0.27
CAPN1-212ENST00000527887 SFT2D3Q587I9 215 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 CEP128Q6ZU80 1094 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 FRA10AC1Q70Z53 315 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 MREGQ8N565 214 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 ARMC2Q8NEN0 867 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 RELTQ969Z4 430 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 MOCOSQ96EN8 888 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 SMIM10Q96HG1 83 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 UTP23Q9BRU9 249 aaKnown RBP13.35□□□□□ -0.27
CAPN1-212ENST00000527887 MCMBPQ9BTE3 642 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 PHACTR1Q9C0D0 580 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 DERL2Q9GZP9 239 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 NT5DC2Q9H857 520 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 CNOT10Q9H9A5 744 aaKnown RBP13.35□□□□□ -0.27
CAPN1-212ENST00000527887 VIPAS39Q9H9C1 493 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 GPRC5BQ9NZH0 403 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 TXNDC16Q9P2K2 825 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 SNX24Q9Y343 169 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 MDC1Q14676 2089 aaKnown RBP13.35□□□□□ -0.27
CAPN1-212ENST00000527887 A0A088AWK7 358 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 PSMD12O00232 456 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-212ENST00000527887 PRMT3O60678 531 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 ZNF888P0CJ79 500 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-212ENST00000527887 C1GALT1C1LP0DN25 315 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 RNH1P13489 461 aaKnown RBP13.34□□□□□ -0.27
CAPN1-212ENST00000527887 ZNF10P21506 573 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-212ENST00000527887 GGT5P36269 586 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 SLC6A12P48065 614 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 PGGT1BP53609 377 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 SLC26A5P58743 744 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 ATP6V0D1P61421 351 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 RBPJQ06330 500 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 FASTKD3Q14CZ7 662 aaKnown RBP13.34□□□□□ -0.27
CAPN1-212ENST00000527887 RBBP5Q15291 538 aaKnown RBP13.34□□□□□ -0.27
CAPN1-212ENST00000527887 ZNF766Q5HY98 468 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 MTFR2Q6P444 385 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 HDXQ7Z353 690 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 TMPRSS11BQ86T26 416 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 KRT78Q8N1N4 520 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 ANKRD53Q8N9V6 530 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 OR5T3Q8NGG3 340 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 RHBDF1Q96CC6 855 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 TSNARE1Q96NA8 513 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 NPLQ9BXD5 320 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-212ENST00000527887 ZDHHC18Q9NUE0 388 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 COPG2Q9UBF2 871 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 IKZF3Q9UKT9 509 aa13.34□□□□□ -0.27
CAPN1-212ENST00000527887 ITPR2Q14571 2701 aa13.33□□□□□ -0.27
CAPN1-212ENST00000527887 NPEPPSL1A6NEC2 478 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 OR2W5A6NFC9 320 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 ZNF860A6NHJ4 632 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 CDC123O75794 336 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-212ENST00000527887 CD46P15529 392 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 HYAL2Q12891 473 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 TUBA3CQ13748 450 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 TGFBIQ15582 683 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 TSNQ15631 228 aaKnown RBP13.33□□□□□ -0.28
CAPN1-212ENST00000527887 ZRSR2Q15696 482 aaKnown RBP13.33□□□□□ -0.28
CAPN1-212ENST00000527887 TUBA3EQ6PEY2 450 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 GFRALQ6UXV0 394 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 TMIGD1Q6UXZ0 262 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 CRLF3Q8IUI8 442 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 BEST3Q8N1M1 668 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 TMEM178AQ8NBL3 297 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 ELP5Q8TE02 316 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 CREB3L4Q8TEY5 395 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 ANKRD49Q8WVL7 239 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 IFT81Q8WYA0 676 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 PTCHD1Q96NR3 888 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 CPNE1Q99829 537 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 SPNS1Q9H2V7 528 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 EHD1Q9H4M9 534 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 PRDM9Q9NQV7 894 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 GRHL1Q9NZI5 618 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 SEC14L3Q9UDX4 400 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 MTRF1LQ9UGC7 380 aaKnown RBP13.33□□□□□ -0.28
CAPN1-212ENST00000527887 MMACHCQ9Y4U1 282 aa13.33□□□□□ -0.28
CAPN1-212ENST00000527887 CRYBG3Q68DQ2 2970 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 TCRBV16S1A1N1A0A5B0 115 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 B4GALT2O60909 372 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 WDR47O94967 919 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 F10P00742 488 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 STMN1P16949 149 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 ECHS1P30084 290 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 GP5P40197 560 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 CD96P40200 585 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 RAB8AP61006 207 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms