RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ART4Q93070 314 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 TADA1Q96BN2 335 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 RMDN1Q96DB5 314 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 ERLEC1Q96DZ1 483 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 SIPA1Q96FS4 1042 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 OXNAD1Q96HP4 312 aaPredicted RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 ZNF419Q96HQ0 510 aaPredicted RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 PPP1R16AQ96I34 528 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 FEM1CQ96JP0 617 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 NSMCE3Q96MG7 304 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 NPAS1Q99742 590 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 TBL1YQ9BQ87 522 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 NUDT16L1Q9BRJ7 211 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 MLPHQ9BV36 600 aaPredicted RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 FICDQ9BVA6 458 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 SORBS1Q9BX66 1292 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 FRMD8Q9BZ67 464 aaPredicted RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 LRRC40Q9H9A6 602 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 DYRK4Q9NR20 520 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 GDF3Q9NR23 364 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 EIF2B3Q9NR50 452 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 NDUFAF4Q9P032 175 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 NFKBIL1Q9UBC1 381 aaPredicted RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 GRHPRQ9UBQ7 328 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 SARDHQ9UL12 918 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 SCML1Q9UN30 329 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 RPL26L1Q9UNX3 145 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 CHKBQ9Y259 395 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 NCKAP1Q9Y2A7 1128 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 KIR2DS5A0A0G2JLQ3 304 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 AGAP5A6NIR3 686 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 SDR42E2A6NKP2 422 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 TRIM64CA6NLI5 447 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 A8MX80 341 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 GOLGA8MH3BSY2 632 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 KIR2DS3K7RE56 304 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 TRAFD1O14545 582 aaPredicted RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 CLGNO14967 610 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 MID1O15344 667 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 SEC31AO94979 1220 aaKnown RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 PDGFBP01127 241 aaPredicted RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 CTSLP07711 333 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 DHRS4L1P0CG22 281 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 MLNP12872 115 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 CTPS1P17812 591 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 GABRG2P18507 467 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 AOC1P19801 751 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 HLA-DPA1P20036 260 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 ADRA1AP35348 466 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 HNF1BP35680 557 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 GRIA1P42261 906 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 PSMD8P48556 350 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 CCR3P51677 355 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 ADPRHP54922 357 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 ZBTB16Q05516 673 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 CDH17Q12864 832 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 TRAF2Q12933 501 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 GALNT3Q14435 633 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 SLC1A5Q15758 541 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 CST6Q15828 149 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 UGP2Q16851 508 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 POM121L1PQ3SYA9 428 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 SIRPB2Q5JXA9 342 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 MANEAQ5SRI9 462 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 ANKRD22Q5VYY1 191 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 ZNF776Q68DI1 518 aaPredicted RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 PLBD1Q6P4A8 553 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 BRAT1Q6PJG6 821 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 CCNI2Q6ZMN8 369 aaPredicted RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 ERN2Q76MJ5 926 aaKnown RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 PIM3Q86V86 326 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 MMP21Q8N119 569 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 PDIK1LQ8N165 341 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 ESX1Q8N693 406 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 EIF1ADQ8N9N8 165 aaKnown RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 ZNF548Q8NEK5 533 aaPredicted RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 LPCAT1Q8NF37 534 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 TSTD1Q8NFU3 115 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 BRSK1Q8TDC3 778 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 PIH1D2Q8WWB5 315 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.37□□□□□ -1.71
USP48-211ENST00000526044 RUBCNQ92622 972 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 RAB7BQ96AH8 199 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 C3orf49Q96BT1 292 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 ECHDC3Q96DC8 303 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 SCRN2Q96FV2 425 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 TRAPPC9Q96Q05 1148 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 OMDQ99983 421 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 APOL2Q9BQE5 337 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 TDRD1Q9BXT4 1180 aaKnown RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 PARD6BQ9BYG5 372 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 FAM129AQ9BZQ8 928 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 TSPYL1Q9H0U9 437 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 NEUROG2Q9H2A3 272 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 EPHX3Q9H6B9 360 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 MAGEE1Q9HCI5 957 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 XAB2Q9HCS7 855 aaKnown RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 FBXL12Q9NXK8 326 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 GRHL1Q9NZI5 618 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms