RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 A0A0A6YYC8 382 aaPredicted RBP19.68■□□□□ 0.74
CD44-222ENST00000526025 MAGEB17A8MXT2 336 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 I3L1I5 382 aaPredicted RBP19.68■□□□□ 0.74
CD44-222ENST00000526025 MANBAO00462 879 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 DYNC1I1O14576 645 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 KLK10O43240 276 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 KLHL18O94889 574 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 SEMA3DO95025 777 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 RECKO95980 971 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 FGF4P08620 206 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 ZNF888P0CJ79 500 aaPredicted RBP19.68■□□□□ 0.74
CD44-222ENST00000526025 IL1RNP18510 177 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 TCN2P20062 427 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 HMOX2P30519 316 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 DLSTP36957 453 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 UCNP55089 124 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 RPS15P62841 145 aaKnown RBP19.68■□□□□ 0.74
CD44-222ENST00000526025 CRTC2Q53ET0 693 aaPredicted RBP19.68■□□□□ 0.74
CD44-222ENST00000526025 ARHGAP40Q5TG30 622 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 LCN10Q6JVE6 187 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 ABHD17CQ6PCB6 329 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 RNF165Q6ZSG1 346 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 CUZD1Q86UP6 607 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 AMER3Q8N944 861 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 OR9A4Q8NGU2 314 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 PPP1R14CQ8TAE6 165 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 METTL6Q8TCB7 284 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 MMABQ96EY8 250 aaPredicted RBP19.68■□□□□ 0.74
CD44-222ENST00000526025 KCNC2Q96PR1 638 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 CCNL2Q96S94 520 aaPredicted RBP19.68■□□□□ 0.74
CD44-222ENST00000526025 MTERF1Q99551 399 aaKnown RBP19.68■□□□□ 0.74
CD44-222ENST00000526025 SERPINI1Q99574 410 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 TBCDQ9BTW9 1192 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 NPLQ9BXD5 320 aaPredicted RBP19.68■□□□□ 0.74
CD44-222ENST00000526025 TGIF2Q9GZN2 237 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 GPN3Q9UHW5 284 aaPredicted RBP19.68■□□□□ 0.74
CD44-222ENST00000526025 PADI2Q9Y2J8 665 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 NAALAD2Q9Y3Q0 740 aa19.68■□□□□ 0.74
CD44-222ENST00000526025 FFAR3O14843 346 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 GPR42O15529 346 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 ERI3O43414 337 aaKnown RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 ULK1O75385 1050 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 SCELO95171 688 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 UROSP10746 265 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 LIFP15018 202 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 IL10P22301 178 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 PTPN4P29074 926 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 OR1D4P47884 311 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 RPS13P62277 151 aaKnown RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 SNRPNP63162 240 aaKnown RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 CSTF3Q12996 717 aaKnown RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 DDX39BQ13838 428 aaKnown RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 CHI3L2Q15782 390 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 ARL13AQ5H913 290 aaPredicted RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 BROXQ5VW32 411 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 FAM199XQ6PEV8 388 aaPredicted RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 ZCCHC23Q6ZST2 131 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 PDSS2Q86YH6 399 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 TRIM42Q8IWZ5 723 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 KIRREL3Q8IZU9 778 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 GBP7Q8N8V2 638 aaPredicted RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 SELENOMQ8WWX9 145 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 COL26A1Q96A83 441 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 RNF31Q96EP0 1072 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 NAF1Q96HR8 494 aaKnown RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 SLC45A3Q96JT2 553 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 FAR2Q96K12 515 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 F2RL3Q96RI0 385 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 MKKSQ9NPJ1 570 aaPredicted RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 MED4Q9NPJ6 270 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 C14orf105Q9NVL8 296 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 NMRK1Q9NWW6 199 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 ZNF282Q9UDV7 671 aaPredicted RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 FARSAQ9Y285 508 aaKnown RBP19.67■□□□□ 0.74
CD44-222ENST00000526025 PTPRQQ9UMZ3 2332 aa19.67■□□□□ 0.74
CD44-222ENST00000526025 VSTM2BA6NLU5 285 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 C4orf51C9J302 202 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 TGFB1P01137 390 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 CCR10P46092 362 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 PPP2R2AP63151 447 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 TLE3Q04726 772 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 DEFB134Q4QY38 66 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 MED25Q71SY5 747 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 PRSS41Q7RTY9 318 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 DTWD1Q8N5C7 304 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 METTL27Q8N6F8 245 aaPredicted RBP19.66■□□□□ 0.74
CD44-222ENST00000526025 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.66■□□□□ 0.74
CD44-222ENST00000526025 RGMAQ96B86 450 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 QRFPRQ96P65 431 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 SERINC2Q96SA4 455 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 PRDM7Q9NQW5 492 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 MAU2Q9Y6X3 613 aa19.66■□□□□ 0.74
CD44-222ENST00000526025 WDR91A4D1P6 747 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 AZIN1O14977 448 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 CRCPO75575 148 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 PDYNP01213 254 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 CHRNGP07510 517 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 CYC1P08574 325 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 NEK2P51955 445 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 MTTPP55157 894 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms