RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SPSB1Q96BD6 273 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 GIMAP5Q96F15 307 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 PGLYRP2Q96PD5 576 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 FEVQ99581 238 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 CPNE1Q99829 537 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 EGFL8Q99944 293 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 FERMT1Q9BQL6 677 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 SLC25A23Q9BV35 468 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 UPF3BQ9BZI7 483 aaKnown RBP3.49□□□□□ -1.85
CD44-219ENST00000525685 SNX25Q9H3E2 840 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 Q9N2K0 584 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 SDR39U1Q9NRG7 319 aaPredicted RBP3.49□□□□□ -1.85
CD44-219ENST00000525685 C5AR2Q9P296 337 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 TXNDC16Q9P2K2 825 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 LRWD1Q9UFC0 647 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 C19orf25Q9UFG5 118 aaPredicted RBP3.49□□□□□ -1.85
CD44-219ENST00000525685 CCPG1Q9ULG6 757 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 MYH6P13533 1939 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 ASTN1O14525 1302 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 ABCB11O95342 1321 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 CEP350Q5VT06 3117 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 A0A1W2PPQ1 181 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 ZBTB5O15062 677 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 AP5Z1O43299 807 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 EML2O95834 649 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 CLPTM1O96005 669 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 AMBPP02760 352 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 CALM1P0DP23 149 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 CALM2P0DP24 149 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 CALM3P0DP25 149 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 CYBAP13498 195 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 CD22P20273 847 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 HOXC8P31273 242 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 KIF5BP33176 963 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 EVCP57679 992 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 SNRPD1P62314 119 aaKnown RBP3.48□□□□□ -1.85
CD44-219ENST00000525685 POLR2LP62875 67 aaKnown RBP3.48□□□□□ -1.85
CD44-219ENST00000525685 MZT1Q08AG7 82 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 RBM39Q14498 530 aaKnown RBP3.48□□□□□ -1.85
CD44-219ENST00000525685 CA9Q16790 459 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 MRGPRG-AS1Q2M3A8 158 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 USH1GQ495M9 461 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 LCN1P1Q5VSP4 162 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 C11orf57Q6ZUT1 292 aaPredicted RBP3.48□□□□□ -1.85
CD44-219ENST00000525685 ERN2Q76MJ5 926 aaKnown RBP3.48□□□□□ -1.85
CD44-219ENST00000525685 SPATA21Q7Z572 469 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 KLHDC8BQ8IXV7 354 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 FBXL16Q8N461 479 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 FAM133AQ8N9E0 248 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 TMEM178AQ8NBL3 297 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 NOA1Q8NC60 698 aaKnown RBP3.48□□□□□ -1.85
CD44-219ENST00000525685 TRPV1Q8NER1 839 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 OR4K1Q8NGD4 311 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 KCNE4Q8WWG9 221 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 PROX1Q92786 737 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 MAGED4Q96JG8 741 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 SPAG5Q96R06 1193 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 SPZ1Q9BXG8 430 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 FAM129AQ9BZQ8 928 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 TRPV4Q9HBA0 871 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 VAT1LQ9HCJ6 419 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 CHST11Q9NPF2 352 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 SCRT2Q9NQ03 307 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 FAM207AQ9NSI2 230 aaPredicted RBP3.48□□□□□ -1.85
CD44-219ENST00000525685 INTS9Q9NV88 658 aaKnown RBP3.48□□□□□ -1.85
CD44-219ENST00000525685 RBM28Q9NW13 759 aaKnown RBP3.48□□□□□ -1.85
CD44-219ENST00000525685 P4HTMQ9NXG6 502 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 DDX43Q9NXZ2 648 aaKnown RBP3.48□□□□□ -1.85
CD44-219ENST00000525685 STUB1Q9UNE7 303 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 DOCK3Q8IZD9 2030 aa3.48□□□□□ -1.85
CD44-219ENST00000525685 PFASO15067 1338 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 ZNFX1Q9P2E3 1918 aaKnown RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 IGHV4-61A0A0C4DH41 118 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 A0A1W2PPM1 405 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 C2orf81A6NN90 581 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 KLF11O14901 512 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 ARPC2O15144 300 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 CDC123O75794 336 aaPredicted RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 SNAI1O95863 264 aaPredicted RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 IGHV4-59P01825 116 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 CD48P09326 243 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 FRMD6-AS1P0C7T7 363 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 ERVK-10P10266 1014 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 PRKAR1AP10644 381 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 CCL5P13501 91 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 CALML3P27482 149 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 CCND3P30281 292 aaPredicted RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 HSD17B3P37058 310 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 GLIPR1P48060 266 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 ZNF41P51814 821 aaPredicted RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 LIMK1P53667 647 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 MAZP56270 477 aaKnown RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 RPS6P62753 249 aaKnown RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 MAT1AQ00266 395 aaKnown RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 CNTN2Q02246 1040 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 TAF10Q12962 218 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 HNRNPDQ14103 355 aaKnown RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 SQLEQ14534 574 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 UGT3A2Q3SY77 523 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 SLC35D3Q5M8T2 416 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms