RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PTPRAP18433 802 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 S1PR1P21453 382 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 CD79BP40259 229 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 TIGD3Q6B0B8 471 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 MON1AQ86VX9 555 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 NEIL3Q8TAT5 605 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 VRK1Q99986 396 aaPredicted RBP13.25□□□□□ -0.29
LRRK1-202ENST00000525284 NUSAP1Q9BXS6 441 aaKnown RBP13.25□□□□□ -0.29
LRRK1-202ENST00000525284 ARMC1Q9NVT9 282 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 THUMPD1Q9NXG2 353 aaKnown RBP13.25□□□□□ -0.29
LRRK1-202ENST00000525284 CNTN3Q9P232 1028 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 DKKL1Q9UK85 242 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 CNTN6Q9UQ52 1028 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 MYPNQ86TC9 1320 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 AQP12BA6NM10 295 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 H0Y8G0 127 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 GLUD1P00367 558 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 ERVK-21P61565 698 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 ERVK-8P63133 956 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 HMGCS1Q01581 520 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 ST3GAL3Q11203 375 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 SNTA1Q13424 505 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 PDGFRLQ15198 375 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 RSU1Q15404 277 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 AQP12AQ8IXF9 295 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 OR51D1Q8NGF3 324 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 DNAJA3Q96EY1 480 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 ABHD16BQ9H3Z7 469 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 REREQ9P2R6 1566 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 PCDH17O14917 1159 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 PRNPP04156 253 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 CKMT1AP12532 417 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 CX3CR1P49238 355 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 HSD11B2P80365 405 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 LIPKQ5VXJ0 399 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 SFRP4Q6FHJ7 346 aaPredicted RBP13.25□□□□□ -0.29
LRRK1-202ENST00000525284 RNF208Q9H0X6 261 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 DNTTIP1Q9H147 329 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 KIAA1210Q9ULL0 1709 aa13.25□□□□□ -0.29
LRRK1-202ENST00000525284 MLLT3P42568 568 aaPredicted RBP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 BRCC3P46736 316 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 PSPHP78330 225 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 GAD2Q05329 585 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 ITPK1Q13572 414 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 NBPF12Q5TAG4 269 aaPredicted RBP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 TATDN1Q6P1N9 297 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 BORAQ6PGQ7 559 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 DNAJB8Q8NHS0 232 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 ZDHHC12Q96GR4 267 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 ZNF442Q9H7R0 627 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 CRTAC1Q9NQ79 661 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 ABCB8Q9NUT2 735 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 GFOD1Q9NXC2 390 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 CA5BQ9Y2D0 317 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 ZFP37Q9Y6Q3 630 aaPredicted RBP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 BHLHE40O14503 412 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 NDUFS4O43181 175 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 ETV5P41161 510 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 FRKP42685 505 aaPredicted RBP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 MRPS6P82932 125 aaKnown RBP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 GSTM4Q03013 218 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 TAF10Q12962 218 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 SEC23AQ15436 765 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 TMEM198Q66K66 360 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 DCLRE1AQ6PJP8 1040 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 NLRP8Q86W28 1048 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 DHDHQ9UQ10 334 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 C11orf98E9PRG8 122 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 MGST1P10620 155 aaKnown RBP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 GP1BBP13224 206 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 DPEP1P16444 411 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 OR1D2P34982 312 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 AIF1P55008 147 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 EEFSECP57772 596 aaKnown RBP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 SEMG2Q02383 582 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 NIPAL3Q6P499 406 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 NUDT13Q86X67 352 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 OR5B17Q8NGF7 314 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 FANK1Q8TC84 345 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 DEDD2Q8WXF8 326 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 HAS2Q92819 552 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 ARL11Q969Q4 196 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 PYCR2Q96C36 320 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 SGCZQ96LD1 299 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 PKP2Q99959 881 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 RLIMQ9NVW2 624 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 ZNF358Q9NW07 568 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 CLEC4EQ9ULY5 219 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 EXOSC1Q9Y3B2 195 aaKnown RBP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 INO80Q9ULG1 1556 aaPredicted RBP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 CRYZL1O95825 349 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 CHATP28329 748 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 SLC6A6P31641 620 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 IRF9Q00978 393 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 TMPRSS12Q86WS5 348 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 FTMTQ8N4E7 242 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 SPPL2BQ8TCT7 592 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 MITD1Q8WV92 249 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 UTS2RQ9UKP6 389 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms