RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ZNF888P0CJ79 500 aaPredicted RBP10.83□□□□□ -0.68
SDCBP-211ENST00000523441 CDH1P12830 882 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 RPS3P23396 243 aaKnown RBP eCLIP10.83□□□□□ -0.686e-7■■■□□ 18.5
SDCBP-211ENST00000523441 JAK1P23458 1154 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 TRHRP34981 398 aaPredicted RBP10.83□□□□□ -0.68
SDCBP-211ENST00000523441 SSR4P51571 173 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 HADHBP55084 474 aaKnown RBP10.83□□□□□ -0.68
SDCBP-211ENST00000523441 TBPL1P62380 186 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 NKX6-1P78426 367 aaPredicted RBP10.83□□□□□ -0.68
SDCBP-211ENST00000523441 ARHGAP19Q14CB8 494 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 PCBP2Q15366 365 aaKnown RBP eCLIP10.83□□□□□ -0.68
SDCBP-211ENST00000523441 ZNF750Q32MQ0 723 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 FLYWCH1Q4VC44 716 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 C1orf185Q5T7R7 199 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 MBOAT1Q6ZNC8 495 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 CXXC5Q7LFL8 322 aaKnown RBP10.83□□□□□ -0.68
SDCBP-211ENST00000523441 SDCCAG8Q86SQ7 713 aaPredicted RBP10.83□□□□□ -0.68
SDCBP-211ENST00000523441 LRRC6Q86X45 466 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 CIARTQ8N365 385 aaPredicted RBP10.83□□□□□ -0.68
SDCBP-211ENST00000523441 PSD4Q8NDX1 1056 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 ZNF740Q8NDX6 193 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 CREB3L4Q8TEY5 395 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 CAPZA3Q96KX2 299 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 TTTY12Q9BZ98 90 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 NECTIN3Q9NQS3 549 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 HPF1Q9NWY4 346 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 EFR3BQ9Y2G0 817 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 H7C1Q1 480 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 WWP2O00308 870 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 BCKDKO14874 412 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 OR1F1O43749 312 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 OR2J2O76002 312 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 IMPA1P29218 277 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 PTPN7P35236 360 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 HSD17B2P37059 387 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 DNASE1L1P49184 302 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 MAN2A2P49641 1150 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 CLCN2P51788 898 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 RAB8AP61006 207 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 MPP1Q00013 466 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 SNX1Q13596 522 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 SLC25A35Q3KQZ1 300 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 PCID2Q5JVF3 399 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 WLSQ5T9L3 541 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 HECTD2Q5U5R9 776 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 UBE2R2Q712K3 238 aaPredicted RBP10.82□□□□□ -0.68
SDCBP-211ENST00000523441 SLC22A16Q86VW1 577 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 C17orf64Q86WR6 236 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 PRELID2Q8N945 189 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 LINC01560Q8TB33 94 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 ASB15Q8WXK1 588 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 LPGAT1Q92604 370 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 MBD6Q96DN6 1003 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 OR1F2PQ96R84 312 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 CCDC77Q9BR77 488 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 TRIM45Q9H8W5 580 aaPredicted RBP10.82□□□□□ -0.68
SDCBP-211ENST00000523441 RIMKLBQ9ULI2 386 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 CSPG4Q6UVK1 2322 aa10.82□□□□□ -0.68
SDCBP-211ENST00000523441 KIAA1549Q9HCM3 1950 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 COL6A5A8TX70 2615 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 ERI2A8K979 691 aaKnown RBP10.81□□□□□ -0.68
SDCBP-211ENST00000523441 INAFM1C9JVW0 142 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 PSMD12O00232 456 aaPredicted RBP10.81□□□□□ -0.68
SDCBP-211ENST00000523441 PRKNO60260 465 aaPredicted RBP10.81□□□□□ -0.68
SDCBP-211ENST00000523441 CEP104O60308 925 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 GALR3O60755 368 aaPredicted RBP10.81□□□□□ -0.68
SDCBP-211ENST00000523441 OR6B1O95007 311 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 MGAT1P26572 445 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 PPP2R1BP30154 601 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 HOXC12P31275 282 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 GRK3P35626 688 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 FDFT1P37268 417 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 SOX3P41225 446 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 AGFG1P52594 562 aaKnown RBP10.81□□□□□ -0.68
SDCBP-211ENST00000523441 DCAF7P61962 342 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 GBX1Q14549 363 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 HERC3Q15034 1050 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 SPA17Q15506 151 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 MRNIPQ6NTE8 343 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 PIWIL4Q7Z3Z4 852 aaKnown RBP10.81□□□□□ -0.68
SDCBP-211ENST00000523441 LRRC56Q8IYG6 542 aaPredicted RBP10.81□□□□□ -0.68
SDCBP-211ENST00000523441 TMEM251Q8N6I4 163 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 ARMC2Q8NEN0 867 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 NFAM1Q8NET5 270 aaPredicted RBP10.81□□□□□ -0.68
SDCBP-211ENST00000523441 B3GNT7Q8NFL0 401 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 NCLNQ969V3 563 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 TM4SF19Q96DZ7 209 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 MFSD3Q96ES6 412 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 PDLIM2Q96JY6 352 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 ZNF148Q9UQR1 794 aa10.81□□□□□ -0.68
SDCBP-211ENST00000523441 KCNE1BA0A087WTH5 132 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 CTAGE9A4FU28 777 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 AKR1B15C9JRZ8 316 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-211ENST00000523441 CBFA2T2O43439 604 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 ZBTB14O43829 449 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 ZNF189O75820 626 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-211ENST00000523441 ZSCAN5DPP0CG00 497 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 ALOX12P18054 663 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 IL10P22301 178 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms