RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 MS4A12Q9NXJ0 267 aa6.05□□□□□ -1.44
IGHV4-55-201ENST00000520889 VPS29Q9UBQ0 182 aa6.05□□□□□ -1.44
IGHV4-55-201ENST00000520889 NXT1Q9UKK6 140 aaKnown RBP6.05□□□□□ -1.44
IGHV4-55-201ENST00000520889 KLK13Q9UKR3 277 aa6.05□□□□□ -1.44
IGHV4-55-201ENST00000520889 PADI1Q9ULC6 663 aa6.05□□□□□ -1.44
IGHV4-55-201ENST00000520889 SSUH2Q9Y2M2 353 aa6.05□□□□□ -1.44
IGHV4-55-201ENST00000520889 TMED5Q9Y3A6 229 aa6.05□□□□□ -1.44
IGHV4-55-201ENST00000520889 CCL27Q9Y4X3 112 aa6.05□□□□□ -1.44
IGHV4-55-201ENST00000520889 DNAJC15Q9Y5T4 150 aa6.05□□□□□ -1.44
IGHV4-55-201ENST00000520889 AHCTF1Q8WYP5 2266 aa6.05□□□□□ -1.44
IGHV4-55-201ENST00000520889 SPTBN2O15020 2390 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 CCDC88CQ9P219 2028 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 C21orf140B9A014 251 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MEN1O00255 615 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 HDAC3O15379 428 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 FOXS1O43638 330 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ITM2AO43736 263 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 BRINP1O60477 761 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 GUCY1B2O75343 617 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 STK17BO94768 372 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 KIAA0754O94854 1291 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 PDYNP01213 254 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 CAPNS1P04632 268 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 EIF2S1P05198 315 aaKnown RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 PCNAP12004 261 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ALOX15P16050 662 aaPredicted RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 TSPAN8P19075 237 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 HIST1H1TP22492 207 aaPredicted RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 HNRNPH1P31943 449 aaKnown RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ATP1A2P50993 1020 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MTTPP55157 894 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 FOXA1P55317 472 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 CLDN6P56747 220 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 PCBP4P57723 403 aaKnown RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 RPS13P62277 151 aaKnown RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 DCDP81605 110 aaKnown RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MAD2L1Q13257 205 aaPredicted RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 DSG2Q14126 1118 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ABRAXAS2Q15018 415 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 AP5B1Q2VPB7 878 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 DEFB110Q30KQ9 67 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 TOR1AIP1Q5JTV8 583 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 SH2D4BQ5SQS7 431 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 CES4AQ5XG92 561 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 OR4C11Q6IEV9 310 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MRPL14Q6P1L8 145 aaKnown RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 C6orf15Q6UXA7 325 aaPredicted RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ATG14Q6ZNE5 492 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 TTLL10Q6ZVT0 673 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 RPS27LQ71UM5 84 aaKnown RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 CRLF3Q8IUI8 442 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 WDR75Q8IWA0 830 aaKnown RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 FAM9CQ8IZT9 166 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ZNF781Q8N8C0 355 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 KCT2Q8NC54 265 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MGARPQ8TDB4 240 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 CHTF18Q8WVB6 975 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 TWIST2Q8WVJ9 160 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 CCT6BQ92526 530 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 GATA6Q92908 595 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 FGF11Q92914 225 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 CLIP3Q96DZ5 547 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MOCOSQ96EN8 888 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ZNF764Q96H86 408 aaPredicted RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 FCRL1Q96LA6 429 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 PPP3R2Q96LZ3 170 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MTERF1Q99551 399 aaKnown RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 TMEM121BQ9BXQ6 578 aaPredicted RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ZNF717Q9BY31 904 aaPredicted RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 DPH1Q9BZG8 443 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 SLC7A5P2Q9GIP4 190 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 C20orf27Q9GZN8 174 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MEAF6Q9HAF1 191 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ZNF304Q9HCX3 659 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MLXIPLQ9NP71 852 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MKKSQ9NPJ1 570 aaPredicted RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 LHX9Q9NQ69 397 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 C14orf105Q9NVL8 296 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 IRAK4Q9NWZ3 460 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 LYARQ9NX58 379 aaKnown RBP6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ASIC5Q9NY37 505 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 ZDHHC2Q9UIJ5 367 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MCM8Q9UJA3 840 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 KCND3Q9UK17 655 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MAPRE3Q9UPY8 281 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 MAP4K5Q9Y4K4 846 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 PCDHGA6Q9Y5G7 932 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 AK5Q9Y6K8 562 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 CFAP54Q96N23 3096 aa6.04□□□□□ -1.44
IGHV4-55-201ENST00000520889 CROCCQ5TZA2 2017 aa6.03□□□□□ -1.44
IGHV4-55-201ENST00000520889 A0A0A6YYD5 115 aa6.03□□□□□ -1.44
IGHV4-55-201ENST00000520889 VSTM2BA6NLU5 285 aa6.03□□□□□ -1.44
IGHV4-55-201ENST00000520889 C9J4A7 227 aa6.03□□□□□ -1.44
IGHV4-55-201ENST00000520889 PLPP1O14494 284 aa6.03□□□□□ -1.44
IGHV4-55-201ENST00000520889 TERTO14746 1132 aaKnown RBP6.03□□□□□ -1.44
IGHV4-55-201ENST00000520889 FFAR3O14843 346 aa6.03□□□□□ -1.44
IGHV4-55-201ENST00000520889 GPR42O15529 346 aa6.03□□□□□ -1.44
IGHV4-55-201ENST00000520889 ERI3O43414 337 aaKnown RBP6.03□□□□□ -1.44
IGHV4-55-201ENST00000520889 B3GALT2O43825 422 aa6.03□□□□□ -1.44
IGHV4-55-201ENST00000520889 RAD1O60671 282 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms