RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 OPN1MWP04001 364 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 KRT6BP04259 564 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 OPN1MW2P0DN77 364 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 OPN1MW3P0DN78 364 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 IGHV4-31P0DP07 118 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 IGHV4-38-2P0DP08 117 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 LIFP15018 202 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 PAX1P15863 534 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 CDH3P22223 829 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 KRT6CP48668 564 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 VEGFCP49767 419 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 CNN1P51911 297 aaKnown RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 HNRNPFP52597 415 aaKnown RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 ATP12AP54707 1039 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 ERVK11-1P61568 191 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 GALK2Q01415 458 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 GCNT1Q02742 428 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 LRRC74AQ0VAA2 488 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 CETN1Q12798 172 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 TRAP1Q12931 704 aaKnown RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 TAF10Q12962 218 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 LCP2Q13094 533 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 NONOQ15233 471 aaKnown RBP eCLIP3.66□□□□□ -1.82
SQLE-204ENST00000520493 PHLDA2Q53GA4 152 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 STXBP5Q5T5C0 1151 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 RIPPLY2Q5TAB7 128 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 RAET1GQ6H3X3 334 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 AFTPHQ6ULP2 937 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 ZER1Q7Z7L7 766 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 LAX1Q8IWV1 398 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 KLHDC8BQ8IXV7 354 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 OR10Q1Q8NGQ4 319 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 TSACCQ96A04 125 aaPredicted RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 SPAG8Q99932 426 aaPredicted RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 URM1Q9BTM9 101 aaKnown RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 RAB17Q9H0T7 212 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 RIBC2Q9H4K1 309 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 ZDHHC6Q9H6R6 413 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 ECT2Q9H8V3 914 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 RPF1Q9H9Y2 349 aaKnown RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 A4GALTQ9NPC4 353 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 SCRT2Q9NQ03 307 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 ZCCHC3Q9NUD5 404 aaKnown RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 SOHLH2Q9NX45 425 aa3.66□□□□□ -1.82
SQLE-204ENST00000520493 NOCTQ9UK39 431 aaKnown RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 RUVBL2Q9Y230 463 aaKnown RBP3.66□□□□□ -1.82
SQLE-204ENST00000520493 NCAPD2Q15021 1401 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 CLRN2A0PK11 232 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 MACROD2A1Z1Q3 448 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 MAGEB16A2A368 324 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 C17orf105B2RV13 164 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 PRSS46E5RG02 174 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 SLC28A1O00337 649 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 MCF2LO15068 1137 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 ATP6V0E1O15342 81 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 ZG16O60844 167 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 PALMO75781 387 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 DIRAS3O95661 229 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 APBB3O95704 486 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 KRT8P05787 483 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 CFC1BP0CG36 223 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 CFC1P0CG37 223 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 STAG3L1P0CL83 205 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 HSPA5P11021 654 aaKnown RBP3.65□□□□□ -1.83
SQLE-204ENST00000520493 KRT5P13647 590 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 CD59P13987 128 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 UGT1A6P19224 532 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 SFTPDP35247 375 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 TIMP3P35625 211 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 CETN2P41208 172 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 ARFIP1P53367 373 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 B3GALT5-AS1P59052 145 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 IRX4P78413 519 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 PMP22Q01453 160 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 PDZK1IP1Q13113 114 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 KARSQ15046 597 aaKnown RBP3.65□□□□□ -1.83
SQLE-204ENST00000520493 XKR6Q5GH73 641 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 HERC4Q5GLZ8 1057 aaPredicted RBP3.65□□□□□ -1.83
SQLE-204ENST00000520493 DCAF10Q5QP82 559 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 PM20D1Q6GTS8 502 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 KLHL10Q6JEL2 608 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 SLC25A24Q6NUK1 477 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 IRGCQ6NXR0 463 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 WDR88Q6ZMY6 472 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 MACC1Q6ZN28 852 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 PRUNE1Q86TP1 453 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 RCOR2Q8IZ40 523 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 CIARTQ8N365 385 aaPredicted RBP3.65□□□□□ -1.83
SQLE-204ENST00000520493 MARVELD2Q8N4S9 558 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 CCDC63Q8NA47 563 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 SIDT2Q8NBJ9 832 aaKnown RBP3.65□□□□□ -1.83
SQLE-204ENST00000520493 U2AF1L4Q8WU68 220 aaKnown RBP3.65□□□□□ -1.83
SQLE-204ENST00000520493 CHURC1Q8WUH1 139 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 GGHQ92820 318 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 NSL1Q96IY1 281 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 ST6GAL2Q96JF0 529 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 CDCA3Q99618 268 aaPredicted RBP3.65□□□□□ -1.83
SQLE-204ENST00000520493 BARHL1Q9BZE3 327 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 CCSER1Q9C0I3 900 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 OR2B2Q9GZK3 357 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms