RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 BSCL2Q96G97 398 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 LURAP1Q96LR2 239 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 CCDC114Q96M63 670 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 TSSK2Q96PF2 358 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 PARK7Q99497 189 aaKnown RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 OVOL2Q9BRP0 275 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 SLCO1C1Q9NYB5 712 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 RABL2AQ9UBK7 228 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 TBK1Q9UHD2 729 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 ZCCHC6Q5VYS8 1495 aaKnown RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 MRC2Q9UBG0 1479 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 RAD54L2Q9Y4B4 1467 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 SDR42E2A6NKP2 422 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 A8MVM7 634 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 KBTBD13C9JR72 458 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 H0Y626 953 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 SURF4O15260 269 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 SCO2O43819 266 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 UGT1A4P22310 534 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 ATP5DP30049 168 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 SSTR1P30872 391 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 TLX1P31314 330 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-207ENST00000518569 TCF7P36402 384 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-207ENST00000518569 HNF4AP41235 474 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 IER3P46695 156 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 NPBWR1P48145 328 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 FASTKD3Q14CZ7 662 aaKnown RBP3.12□□□□□ -1.91
VPS13B-207ENST00000518569 PPA1Q15181 289 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 MEP1BQ16820 701 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 FAM106AQ4KMX7 169 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 FAM46CQ5VWP2 391 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 OR4C11Q6IEV9 310 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF770Q6IQ21 691 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-207ENST00000518569 CNSTQ6PJW8 725 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 KIF6Q6ZMV9 814 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 MACC1Q6ZN28 852 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 ZER1Q7Z7L7 766 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 KLHL7Q8IXQ5 586 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 TCEANCQ8N8B7 351 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 ATAD1Q8NBU5 361 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 BRSK1Q8TDC3 778 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 ITFG2Q969R8 447 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 EXOC4Q96A65 974 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 NXPE2Q96DL1 559 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 FAM218AQ96MZ4 157 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 AGAP3Q96P47 875 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 ALKBH7Q9BT30 221 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-207ENST00000518569 NACAP1Q9BZK3 213 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 TRIM15Q9C019 465 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 DNAI2Q9GZS0 605 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 RPF1Q9H9Y2 349 aaKnown RBP3.12□□□□□ -1.91
VPS13B-207ENST00000518569 GRPEL1Q9HAV7 217 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 SPHK2Q9NRA0 654 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 ZNHIT6Q9NWK9 470 aaKnown RBP3.12□□□□□ -1.91
VPS13B-207ENST00000518569 TEX10Q9NXF1 929 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-207ENST00000518569 NDE1Q9NXR1 346 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 DNAJB9Q9UBS3 223 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 LNPEPQ9UIQ6 1025 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 BLOC1S6Q9UL45 172 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 DUSP12Q9UNI6 340 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 MTF2Q9Y483 593 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-207ENST00000518569 HMGXB3Q12766 1538 aa3.12□□□□□ -1.91
VPS13B-207ENST00000518569 SMARCA4P51532 1647 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 ARAP1Q96P48 1450 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 A0A087WZ39 114 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 A0A0J9YWU9 116 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 IQCMA0A1B0GVH7 501 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 CCDC69A6NI79 296 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-207ENST00000518569 PI4K2BG5E9Z4 385 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 RNF103O00237 685 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 CASQ2O14958 399 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-207ENST00000518569 DUS4LO95620 317 aaKnown RBP3.11□□□□□ -1.91
VPS13B-207ENST00000518569 SP9P0CG40 484 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 P4HA1P13674 534 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 EDNRAP25101 427 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 PIK3R1P27986 724 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 TNNT3P45378 269 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-207ENST00000518569 CETN1Q12798 172 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 CALCOCO2Q13137 446 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 NFATC2Q13469 925 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 GRB14Q14449 540 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 NECTIN1Q15223 517 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 MOGAT2Q3SYC2 334 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 NHSL2Q5HYW2 709 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.11□□□□□ -1.91
VPS13B-207ENST00000518569 ATP1A1-AS1Q5TC04 95 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 CES4AQ5XG92 561 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 SHQ1Q6PI26 577 aaKnown RBP3.11□□□□□ -1.91
VPS13B-207ENST00000518569 DHRS11Q6UWP2 260 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 PIGWQ7Z7B1 504 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF440Q8IYI8 595 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 SLC22A15Q8IZD6 547 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 TMCO5AQ8N6Q1 288 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 MAPK1IP1LQ8NDC0 245 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 CKAP2Q8WWK9 683 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 GIMAP1Q8WWP7 306 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF689Q96CS4 500 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-207ENST00000518569 IL12RB2Q99665 862 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 RBM4BQ9BQ04 359 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms