RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 URGCPQ8TCY9 931 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 UBLCP1Q8WVY7 318 aaPredicted RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 N4BP2L2Q92802 583 aaPredicted RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 RIT1Q92963 219 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 VPS39Q96JC1 886 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 KLHL5Q96PQ7 755 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 MYADMQ96S97 322 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 NAP1L3Q99457 506 aaPredicted RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 PKP2Q99959 881 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 PSD2Q9BQI7 771 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 RTP3Q9BQQ7 232 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 RHNO1Q9BSD3 238 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 BTBD10Q9BSF8 475 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 C16orf70Q9BSU1 422 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 OSBPL8Q9BZF1 889 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 VN1R1Q9GZP7 353 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 SYTL2Q9HCH5 934 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 ACKR4Q9NPB9 350 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 ZNF71Q9NQZ8 489 aaPredicted RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 ECHDC1Q9NTX5 307 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 ZNF701Q9NV72 531 aaPredicted RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 TRIM10Q9UDY6 481 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 TRMT6Q9UJA5 497 aaKnown RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 CCPG1Q9ULG6 757 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 ABT1Q9ULW3 272 aaKnown RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 KCNJ14Q9UNX9 436 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 TEX264Q9Y6I9 313 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 IQGAP3Q86VI3 1631 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 CACNA1FO60840 1977 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 NRXN1Q9ULB1 1477 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 NEXMIFQ5QGS0 1516 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 PIK3C2GO75747 1445 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 SPATA31E1Q6ZUB1 1445 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 CHD2O14647 1828 aaKnown RBP2.87□□□□□ -1.95
HERC4-215ENST00000515753 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 A0A087X002 238 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 FEZF1A0PJY2 475 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 FAM149AA5PLN7 773 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 DUXAA6NLW8 204 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 HEPACAM2A8MVW5 462 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 HHLA1C9JL84 531 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 AP5Z1O43299 807 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 PPIP5K2O43314 1243 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 XRCC3O43542 346 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 GLCEO94923 617 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 REC8O95072 547 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 TPM2P07951 284 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 CD48P09326 243 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 FRMD6-AS1P0C7T7 363 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 KRT5P13647 590 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 RPS2P15880 293 aaKnown RBP2.87□□□□□ -1.95
HERC4-215ENST00000515753 FERP16591 822 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 CD22P20273 847 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 EFNA1P20827 205 aaPredicted RBP2.87□□□□□ -1.95
HERC4-215ENST00000515753 AHCYP23526 432 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 CCND2P30279 289 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 ADSSP30520 456 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 HSD17B3P37058 310 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 PRPHP41219 470 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 RABIFP47224 123 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 CAMLGP49069 296 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 GMPSP49915 693 aaPredicted RBP2.87□□□□□ -1.95
HERC4-215ENST00000515753 MFAP3P55082 362 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 KCNJ10P78508 379 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 ARHGAP1Q07960 439 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 LGALS3BPQ08380 585 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 PRKAA1Q13131 559 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 P2RY6Q15077 328 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 IFI44LQ53G44 452 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 TEX35Q5T0J7 233 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 CASC1Q6TDU7 716 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 OLFM4Q6UX06 510 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 MFSD7Q6UXD7 560 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 ZNF497Q6ZNH5 498 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 TOM1L2Q6ZVM7 507 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 PRSS42Q7Z5A4 293 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 ZNF554Q86TJ5 538 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 BATF2Q8N1L9 274 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 AMER3Q8N944 861 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 DENND6BQ8NEG7 585 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 OR2AJ1Q8NGZ0 328 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 ZNF606Q8WXB4 792 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 HSD17B8Q92506 261 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 TMEM186Q96B77 213 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 GIMAP5Q96F15 307 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 CFAP36Q96G28 342 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 RBM18Q96H35 190 aaKnown RBP2.87□□□□□ -1.95
HERC4-215ENST00000515753 FAM81BQ96LP2 452 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 SPATA33Q96N06 139 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 LSG1Q9H089 658 aaKnown RBP2.87□□□□□ -1.95
HERC4-215ENST00000515753 NT5C3AQ9H0P0 336 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 DPAGT1Q9H3H5 408 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 TBC1D17Q9HA65 648 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.87□□□□□ -1.95
HERC4-215ENST00000515753 TMEM181Q9P2C4 612 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 RHCGQ9UBD6 479 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 EXTL2Q9UBQ6 330 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 GMEB2Q9UKD1 530 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 TSPAN16Q9UKR8 245 aa2.87□□□□□ -1.95
HERC4-215ENST00000515753 RABL2BQ9UNT1 228 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms