RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 GPR17Q13304 367 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 TEAD4Q15561 434 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 FNDC3BQ53EP0 1204 aaKnown RBP13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 C22orf42Q6IC83 251 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 PSRC1Q6PGN9 363 aaPredicted RBP13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 USP45Q70EL2 814 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 NLGN4XQ8N0W4 816 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 TCEANCQ8N8B7 351 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 UXS1Q8NBZ7 420 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 GPR150Q8NGU9 434 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 KLHL6Q8WZ60 621 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 FYTTD1Q96QD9 318 aaKnown RBP13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 VPS29Q9UBQ0 182 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 UPK1AO00322 258 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 SSNA1O43805 119 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 PCDH8O95206 1070 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 RPL34P49207 117 aaKnown RBP13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 SLC39A5Q6ZMH5 540 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 C2orf15Q8WU43 125 aaKnown RBP13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 C1orf74Q96LT6 269 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 TMEM175Q9BSA9 504 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 POLR2J3Q9H1A7 115 aaKnown RBP13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 NLKQ9UBE8 527 aa13.12□□□□□ -0.31
SH3TC1-225ENST00000515682 OR7A17O14581 309 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 ANKRD28O15084 1053 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 ADAMTS4O75173 837 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 NUDT7P0C024 238 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 UQCRC1P31930 480 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 CSTF2P33240 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 TARDBPQ13148 414 aaKnown RBP eCLIP13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 SLC14A2Q15849 920 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 DCST1Q5T197 706 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 SNX20Q7Z614 316 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 ENTHD1Q8IYW4 607 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 C2orf73Q8N5S3 287 aaPredicted RBP13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 TTC9BQ8N6N2 239 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 SLC37A3Q8NCC5 494 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 B3GNT7Q8NFL0 401 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 ING5Q8WYH8 240 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 PEX13Q92968 403 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 SEMA3GQ9NS98 782 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 FNIP2Q9P278 1114 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 ZNF225Q9UK10 706 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 YIPF1Q9Y548 306 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 COL4A5P29400 1685 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 MEN1O00255 615 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 SSX4O60224 188 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 CDK1P06493 297 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 ADORA3P0DMS8 318 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 PTGS2P35354 604 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 SNRPD1P62314 119 aaKnown RBP13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 ZNF267Q14586 743 aaPredicted RBP13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 CCDC115Q96NT0 180 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 PSKH2Q96QS6 385 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 MAT2BQ9NZL9 334 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 RUVBL1Q9Y265 456 aaKnown RBP13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 GREB1LQ9C091 1923 aaPredicted RBP13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 TRBC2A0A5B9 178 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 NEDD8-MDP1E9PL57 170 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 CATP04040 527 aaKnown RBP13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 CDH4P55283 916 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 CCDC58Q4VC31 144 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 TPGS2Q68CL5 300 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 PAMR1Q6UXH9 720 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 ZNF367Q7RTV3 350 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 LACC1Q8IV20 430 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 ZNF557Q8N988 423 aaPredicted RBP13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 SUSD6Q92537 303 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 YIPF6Q96EC8 236 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 OR5M11Q96RB7 305 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 SLC35A5Q9BS91 424 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 CCDC32Q9BV29 185 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 UCK2Q9BZX2 261 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 ACSL6Q9UKU0 697 aa13.11□□□□□ -0.31
SH3TC1-225ENST00000515682 SLC35F4A4IF30 521 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 GRXCR2A6NFK2 248 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 AP3D1O14617 1153 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 TLX2O43763 284 aaPredicted RBP13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 GJA1P17302 382 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 SPAM1P38567 509 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 NKX3-2P78367 333 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 SPHARQ15513 63 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 TBCEQ15813 527 aaPredicted RBP13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 CTSL3PQ5NE16 218 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 LRRC66Q68CR7 880 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 CXorf57Q6NSI4 855 aaKnown RBP13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 MZT2AQ6P582 158 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 OR5H6Q8NGV6 325 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 ACPTQ9BZG2 426 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 FAM83DQ9H4H8 585 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 CCDC59Q9P031 241 aaKnown RBP13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 ANKRD31Q8N7Z5 1873 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 ISM1B1AKI9 464 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 HHLA1C9JL84 531 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 LAMP1P11279 417 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 SDC1P18827 310 aa13.1□□□□□ -0.31
SH3TC1-225ENST00000515682 CNR2P34972 360 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms