RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 PRR7Q8TB68 274 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 STAG3L4Q8TBR4 150 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 NT5CQ8TCD5 201 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 KCTD4Q8WVF5 259 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 CAVIN3Q969G5 261 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 TBC1D20Q96BZ9 403 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 C19orf60Q96EN9 201 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 CYTH2Q99418 400 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 RHOXF2Q9BQY4 288 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 TMEM79Q9BSE2 394 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 CAPS2Q9BXY5 557 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.14□□□□□ -1.43
KDM3B-208ENST00000512928 ZNF700Q9H0M5 742 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 VPS11Q9H270 941 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 CDC42EP4Q9H3Q1 356 aaKnown RBP6.14□□□□□ -1.43
KDM3B-208ENST00000512928 KLHL31Q9H511 634 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 ACSS3Q9H6R3 686 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 COPS7BQ9H9Q2 264 aaPredicted RBP6.14□□□□□ -1.43
KDM3B-208ENST00000512928 NMRAL1Q9HBL8 299 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 SNX15Q9NRS6 342 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 ASF1BQ9NVP2 202 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 PLA2G3Q9NZ20 509 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 NUDT4Q9NZJ9 180 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 NFU1Q9UMS0 254 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 ACOT9Q9Y305 439 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 ANGPTL3Q9Y5C1 460 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 COPG1Q9Y678 874 aaKnown RBP6.14□□□□□ -1.43
KDM3B-208ENST00000512928 SLC22A7Q9Y694 548 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 HEATR5BQ9P2D3 2071 aa6.14□□□□□ -1.43
KDM3B-208ENST00000512928 A0A087X1B8 175 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 A0A088AWK7 358 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 A0A096LPK6 155 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SYCE1LA8MT33 242 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TCP11X1B4DZS4 312 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 POC1B-GALNT4F8VUJ3 575 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 PCDH17O14917 1159 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 ERI3O43414 337 aaKnown RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 PRMT3O60678 531 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 DNAJB6O75190 326 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SH3BGRLO75368 114 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 AGFG2O95081 481 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TUBBP07437 444 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 LTA4HP09960 611 aaKnown RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 ITGAMP11215 1152 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 PCNAP12004 261 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 ICAM2P13598 275 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 MAOAP21397 527 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 ZNF10P21506 573 aaPredicted RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 GCAP28676 217 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TYK2P29597 1187 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 HPDP32754 393 aaPredicted RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 MAGEA12P43365 314 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SLC6A12P48065 614 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 AGTR2P50052 363 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SERPINB8P50452 374 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 EFNA3P52797 238 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 PLA2G16P53816 162 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SOX8P57073 446 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 OR4D2P58180 307 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 IRF8Q02556 426 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 MRPL49Q13405 166 aaKnown RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 DDX39BQ13838 428 aaKnown RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 DOC2AQ14183 400 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 PCOLCEQ15113 449 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TLR1Q15399 786 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 NR6A1Q15406 480 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 HIST2H2ACQ16777 129 aaPredicted RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 FAM83EQ2M2I3 478 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 ERCC6LQ2NKX8 1250 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SFT2D3Q587I9 215 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 PAGE2BQ5JRK9 111 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 ABHD17BQ5VST6 288 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 B3GNTL1Q67FW5 361 aaPredicted RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 FCRLBQ6BAA4 426 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 HIST2H2AA3Q6FI13 130 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 ADNP2Q6IQ32 1131 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 NIPAL1Q6NVV3 410 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TRIM40Q6P9F5 258 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 EMBQ6PCB8 327 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TMEM205Q6UW68 189 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 IGFL3Q6UXB1 125 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SLCO4C1Q6ZQN7 724 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TRMT10CQ7L0Y3 403 aaKnown RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TAOK1Q7L7X3 1001 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 LRRC70Q7Z2Q7 622 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 CUZD1Q86UP6 607 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 FAM47BQ8NA70 645 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 GALNT11Q8NCW6 608 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 CATSPER1Q8NEC5 780 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TTLQ8NG68 377 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 OR1N1Q8NGS0 311 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SUN3Q8TAQ9 357 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 UTP15Q8TED0 518 aaKnown RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 PPP4R1Q8TF05 950 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TSLPQ969D9 159 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 KIAA1191Q96A73 305 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 NXNL1Q96CM4 212 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SNRNP40Q96DI7 357 aaKnown RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SCYL1Q96KG9 808 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 UBXN10Q96LJ8 280 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms