RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ACSL3O95573 720 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 VIMP08670 466 aaKnown RBP3.88□□□□□ -1.79
HTT-210ENST00000512909 FAM86B2P0C5J1 330 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 SMIM18P0DKX4 95 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 PRKAR1AP10644 381 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 ACAT1P24752 427 aaKnown RBP3.88□□□□□ -1.79
HTT-210ENST00000512909 TMOD1P28289 359 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 CD52P31358 61 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 KRT2P35908 639 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 CETN2P41208 172 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 LHX1P48742 406 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 HERV-K104P61576 105 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 DEFB103AP81534 67 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 ITGB3BPQ13352 177 aaPredicted RBP3.88□□□□□ -1.79
HTT-210ENST00000512909 VEZF1Q14119 521 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 HYAL4Q2M3T9 481 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 GRTP1Q5TC63 336 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 SLC35E4Q6ICL7 350 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 C19orf48Q6RUI8 117 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 CEACAM20Q6UY09 585 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 LINGO4Q6UY18 593 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 C18orf65Q6ZTR6 163 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 DNAJB7Q7Z6W7 309 aaPredicted RBP3.88□□□□□ -1.79
HTT-210ENST00000512909 CCDC83Q8IWF9 413 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 THAP8Q8NA92 274 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 OR13C3Q8NGS6 347 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 PHOSPHO2Q8TCD6 241 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 DEPDC1BQ8WUY9 529 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 EXT2Q93063 718 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 FAM162AQ96A26 154 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 LINC00615Q96LM1 132 aaPredicted RBP3.88□□□□□ -1.79
HTT-210ENST00000512909 CCDC114Q96M63 670 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 CCDC43Q96MW1 224 aaKnown RBP3.88□□□□□ -1.79
HTT-210ENST00000512909 GUCD1Q96NT3 240 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 RAD9AQ99638 391 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 CPNE1Q99829 537 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 ADPGKQ9BRR6 497 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 PITPNM3Q9BZ71 974 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 CHST11Q9NPF2 352 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 C5AR2Q9P296 337 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 ZNF580Q9UK33 172 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 RNF150Q9ULK6 438 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 LAMB1P07942 1786 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 COL11A1P12107 1806 aaPredicted RBP3.88□□□□□ -1.79
HTT-210ENST00000512909 ZNFX1Q9P2E3 1918 aaKnown RBP3.87□□□□□ -1.79
HTT-210ENST00000512909 A0A1B0GUV1 79 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 A0A1W2PN81 502 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 CTAGE9A4FU28 777 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 H3BQV1 296 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 EPHB6O15197 1021 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 SLC22A3O75751 556 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 WISP2O76076 250 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 TDP2O95551 362 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 CCNE2O96020 404 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 IGHV2-70P01814 119 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 CHRNA1P02708 482 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 VTNP04004 478 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 EDN1P05305 212 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 PLA2G4BP0C869 781 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 CTAGE8P0CG41 777 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 STAG3L1P0CL83 205 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 CDC25CP30307 473 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 CHRNA7P36544 502 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 NPY4RP50391 375 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 LIMK1P53667 647 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 NLRP11P59045 1033 aaKnown RBP3.87□□□□□ -1.79
HTT-210ENST00000512909 MRPS6P82932 125 aaKnown RBP3.87□□□□□ -1.79
HTT-210ENST00000512909 LGALS3BPQ08380 585 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 BFSP1Q12934 665 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 GPM6BQ13491 265 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 BTG3Q14201 252 aaPredicted RBP3.87□□□□□ -1.79
HTT-210ENST00000512909 RBBP5Q15291 538 aaKnown RBP3.87□□□□□ -1.79
HTT-210ENST00000512909 ZRSR1Q15695 479 aaKnown RBP3.87□□□□□ -1.79
HTT-210ENST00000512909 KLHL26Q53HC5 615 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 SYT14P1Q58G82 188 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 LCN1P1Q5VSP4 162 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 ARMC3Q5W041 872 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 GALNT17Q6IS24 598 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 SH2D5Q6ZV89 423 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 OTUD6AQ7L8S5 288 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 NIPA1Q7RTP0 329 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 NUP54Q7Z3B4 507 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 DGLUCYQ7Z3D6 616 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 TMPRSS11BQ86T26 416 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 SERINC5Q86VE9 423 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 AMIGO1Q86WK6 493 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 TMEM139Q8IV31 216 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 CTAGE4Q8IX94 777 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 TMCO5AQ8N6Q1 288 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 OR10V1Q8NGI7 309 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 OR13J1Q8NGT2 312 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 SLC26A7Q8TE54 656 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 KCNE4Q8WWG9 221 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 HSD17B8Q92506 261 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 PROX1Q92786 737 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 PGM2Q96G03 612 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 C8orf76Q96K31 380 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 TGS1Q96RS0 853 aaKnown RBP3.87□□□□□ -1.79
HTT-210ENST00000512909 FNBP1Q96RU3 617 aa3.87□□□□□ -1.79
HTT-210ENST00000512909 FEVQ99581 238 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms