RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PYROXD2Q8N2H3 581 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 NRACQ8N912 160 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC37A3Q8NCC5 494 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRPV3Q8NET8 790 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SPATA4Q8NEY3 305 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 OR5H6Q8NGV6 325 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 HUS1BQ8NHY5 278 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SCAMP5Q8TAC9 235 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 STT3BQ8TCJ2 826 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 HM13Q8TCT9 377 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PPP4R1Q8TF05 950 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PYDC1Q8WXC3 89 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PSPC1Q8WXF1 523 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PTP4A1Q93096 173 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 MARC2Q969Z3 335 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 MAGOHBQ96A72 148 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 RFT1Q96AA3 541 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARRDC3Q96B67 414 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARHGEF26Q96DR7 871 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 HES6Q96HZ4 224 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 VCPIP1Q96JH7 1222 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CAPZA3Q96KX2 299 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CNOT6LQ96LI5 555 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF285Q96NJ3 590 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM111AQ96PZ2 611 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF251Q9BRH9 671 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 NTMT1Q9BV86 223 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 IFT27Q9BW83 186 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF416Q9BWM5 594 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PINK1Q9BXM7 581 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TM6SF1Q9BZW5 370 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZYG11BQ9C0D3 744 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM234AQ9H0X4 552 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ISCUQ9H1K1 167 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 GOLPH3Q9H4A6 298 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARMC7Q9H6L4 198 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SPACA1Q9HBV2 294 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 IFT46Q9NQC8 304 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 DDX4Q9NQI0 724 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PCDHB16Q9NRJ7 776 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 RGS18Q9NS28 235 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 B3GNT2Q9NY97 397 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 MSRB1Q9NZV6 116 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TXNDC16Q9P2K2 825 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 RCOR3Q9P2K3 495 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 NFKBIL1Q9UBC1 381 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 POU2F3Q9UKI9 436 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CDH9Q9ULB4 789 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 RAB23Q9ULC3 237 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SNX12Q9UMY4 172 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SAMHD1Q9Y3Z3 626 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CPQQ9Y646 472 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 WNK3Q9BYP7 1800 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 MYH15Q9Y2K3 1946 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM205AQ6ZU69 1335 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 A0A1W2PRG0 241 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 NCF1BA6NI72 391 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 C12orf71A8MTZ7 269 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 NCF1CA8MVU1 366 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CLDN25C9JDP6 229 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 LOC110117498-PIK3R3F6TDL0 507 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 H3BMM5 538 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 TSPAN4O14817 238 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 SCAMP1O15126 338 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 TM9SF1O15321 606 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 RGS16O15492 202 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 INSIG1O15503 277 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CALUO43852 315 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT1A9O60656 530 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CST8O60676 142 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ENTPD5O75356 428 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 KRT36O76013 467 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 HEXIM1O94992 359 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 OR6B1O95007 311 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 NADKO95544 446 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 LDOC1O95751 146 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 PTBP3O95758 552 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 FTCDO95954 541 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 TNNC2P02585 160 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 S100A8P05109 93 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 POLBP06746 335 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 FABP1P07148 127 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 YES1P07947 543 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 PLEKP08567 350 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 NUDT17P0C025 328 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 SNHG28P0DPA3 235 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 PSG1P11464 419 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CKMT1AP12532 417 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 DARSP14868 501 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CYP11B1P15538 503 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF18P17022 549 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 GM2AP17900 193 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT1A6P19224 532 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT1A1P22309 533 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT1A4P22310 534 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 POU1F1P28069 291 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT1A3P35503 534 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT1A5P35504 534 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 HSD17B3P37058 310 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 EIF2S3P41091 472 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms