RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 MPC1LP0DKB6 136 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 GLI4P10075 376 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 COILP38432 576 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-211ENST00000508546 KIR2DL3P43628 341 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 CLCN7P51798 805 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 NR0B1P51843 470 aaKnown RBP8.75□□□□□ -1.01
NEDD9-211ENST00000508546 SESN2P58004 480 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-211ENST00000508546 GPR85P60893 370 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 CRADDP78560 199 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 TBX2Q13207 712 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-211ENST00000508546 TTLL9Q3SXZ7 439 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 NIPAL1Q6NVV3 410 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 PAMR1Q6UXH9 720 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 B3GNT6Q6ZMB0 384 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 MDGA2Q7Z553 956 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 CDC20BQ86Y33 519 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 KRTAP1-3Q8IUG1 177 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 LIX1LQ8IVB5 337 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 LRRC8AQ8IWT6 810 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 CYP4X1Q8N118 509 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 TMEM156Q8N614 296 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 OTUD6BQ8N6M0 293 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 APCDD1LQ8NCL9 501 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 GOT1L1Q8NHS2 421 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-211ENST00000508546 PTCHD1Q96NR3 888 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 DEFB127Q9H1M4 99 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 CLK4Q9HAZ1 481 aaKnown RBP8.75□□□□□ -1.01
NEDD9-211ENST00000508546 TIMMDC1Q9NPL8 285 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 CCDC177Q9NQR7 707 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-211ENST00000508546 Q9UFV3 132 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 CRYL1Q9Y2S2 319 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 FAM215AQ9Y5M1 114 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 DUSP10Q9Y6W6 482 aa8.75□□□□□ -1.01
NEDD9-211ENST00000508546 A0A1B0GVC2 190 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 GRID2IPA4D2P6 1211 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 A6NNC1 897 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 RNF212BA8MTL3 300 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 MIF4GDA9UHW6 222 aaKnown RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 FAM47E-STBD1D6RA91 191 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 ACOT7O00154 380 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 AP3B1O00203 1094 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 LIASO43766 372 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 WDR1O75083 606 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 ITGA10O75578 1167 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 IFNB1P01574 187 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 IGHG3P01860 377 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 RAF1P04049 648 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 ENO3P13929 434 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 ALOX12P18054 663 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 OGNP20774 298 aaKnown RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 HOXC12P31275 282 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 GRK3P35626 688 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 CYLC1P35663 651 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 NPY2RP49146 381 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 CLCN2P51788 898 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 NAP1L1P55209 391 aaKnown RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 TBPL1P62380 186 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 PPIAP62937 165 aaKnown RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 CCZ1BP86790 482 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 CCZ1P86791 482 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 PWP1Q13610 501 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 TERF2Q15554 542 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 DEFB113Q30KQ7 82 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 FLYWCH1Q4VC44 716 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 RTL6Q6ICC9 239 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 CYHR1Q6ZMK1 362 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 C17orf64Q86WR6 236 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 CILP2Q8IUL8 1156 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 GPALPP1Q8IXQ4 340 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 UBL4BQ8N7F7 174 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 PRELID2Q8N945 189 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 TC2NQ8N9U0 490 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 MFSD9Q8NBP5 474 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 PSD4Q8NDX1 1056 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 ZNF740Q8NDX6 193 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 ACRBPQ8NEB7 543 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 B3GNT7Q8NFL0 401 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 OR5M9Q8NGP3 310 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 GIMAP7Q8NHV1 300 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 ATG4AQ8WYN0 398 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 MFSD3Q96ES6 412 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 SMC6Q96SB8 1091 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 SLC30A3Q99726 388 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 KIFC1Q9BW19 673 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 FRMD8P1Q9BZ68 369 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 PRDM9Q9NQV7 894 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 EIF2B3Q9NR50 452 aaKnown RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 DEPPQ9NTK1 212 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 BFARQ9NZS9 450 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 CRIM1Q9NZV1 1036 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 PAK5Q9P286 719 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 B4GALT7Q9UBV7 327 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 AMFRQ9UKV5 643 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 PPIEQ9UNP9 301 aaKnown RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 DRG1Q9Y295 367 aaKnown RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 VPS9D1Q9Y2B5 631 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 YARS2Q9Y2Z4 477 aaKnown RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 ANK3Q12955 4377 aaKnown RBP8.74□□□□□ -1.01
NEDD9-211ENST00000508546 DOCK7Q96N67 2140 aa8.74□□□□□ -1.01
NEDD9-211ENST00000508546 TRBV11-1A0A0K0K1C0 115 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms