RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 C5orf34Q96MH7 638 aa13.42□□□□□ -0.26
RAB28-205ENST00000508274 RHBGQ9H310 441 aa13.42□□□□□ -0.26
RAB28-205ENST00000508274 KCNK13Q9HB14 408 aa13.42□□□□□ -0.26
RAB28-205ENST00000508274 WWOXQ9NZC7 414 aa13.42□□□□□ -0.26
RAB28-205ENST00000508274 OSGIN2Q9Y236 505 aa13.42□□□□□ -0.26
RAB28-205ENST00000508274 UTP11Q9Y3A2 253 aaKnown RBP13.42□□□□□ -0.26
RAB28-205ENST00000508274 A0A0G2JN53 185 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 FAM227AF5H4B4 570 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 PRAMEF4O60810 478 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 CLDN1O95832 211 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 DDAH2O95865 285 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 C1GALT1C1LP0DN25 315 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 STMN1P16949 149 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 GNAZP19086 355 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 HNRNPH1P31943 449 aaKnown RBP13.41□□□□□ -0.26
RAB28-205ENST00000508274 HSPA7P48741 367 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 OR4D2P58180 307 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 SKP1P63208 163 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 ACTN3Q08043 901 aaPredicted RBP13.41□□□□□ -0.26
RAB28-205ENST00000508274 EFTUD2Q15029 972 aaKnown RBP eCLIP13.41□□□□□ -0.26
RAB28-205ENST00000508274 ZKSCAN8Q15776 578 aaPredicted RBP13.41□□□□□ -0.26
RAB28-205ENST00000508274 EXT1Q16394 746 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 ACER2Q5QJU3 275 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 PRAMEF9Q5VWM5 478 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 ADNP2Q6IQ32 1131 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 H3F3CQ6NXT2 135 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 CMC1Q7Z7K0 106 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 CRLF3Q8IUI8 442 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 KIF2BQ8N4N8 673 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 PPM1NQ8N819 430 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 EXT2Q93063 718 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 TSPAN17Q96FV3 270 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 LPAR4Q99677 370 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 ANKRD10Q9NXR5 420 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 TEKT2Q9UIF3 430 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 ASB1Q9Y576 335 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 UNC79Q9P2D8 2635 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 ESYT3A0FGR9 886 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 URADA6NGE7 173 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 SERPINA6P08185 405 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 MAOAP21397 527 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 JAK1P23458 1154 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 COL8A1P27658 744 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 KCNK10P57789 538 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 SLC26A5P58743 744 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 RAB10P61026 200 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 PMP22Q01453 160 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 SLC7A5Q01650 507 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 DLG1Q12959 904 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 SLMAPQ14BN4 828 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 C4orf17Q53FE4 359 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 TMIGD1Q6UXZ0 262 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 CYS1Q717R9 158 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 GPSM1Q86YR5 675 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 CA13Q8N1Q1 262 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 M1APQ8TC57 530 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 FBF1Q8TES7 1133 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 CCT6BQ92526 530 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 NR4A3Q92570 626 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 PTCHD1Q96NR3 888 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 SIGLEC12Q96PQ1 595 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 RAB17Q9H0T7 212 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 MMP25Q9NPA2 562 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 NECTIN3Q9NQS3 549 aa13.41□□□□□ -0.26
RAB28-205ENST00000508274 PRAMEF2O60811 474 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 TBX6O95947 436 aaPredicted RBP13.4□□□□□ -0.26
RAB28-205ENST00000508274 GSTA2P09210 222 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 MST1P26927 711 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 MAGEA4P43358 317 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 KCNC1P48547 511 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 BTN3A2P78410 334 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 INAQ16352 499 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 NIPAL1Q6NVV3 410 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 QSOX2Q6ZRP7 698 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 ZNF572Q7Z3I7 529 aaPredicted RBP13.4□□□□□ -0.26
RAB28-205ENST00000508274 VN1R5Q7Z5H4 357 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 CYP4X1Q8N118 509 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 PDPRQ8NCN5 879 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 MS4A6EQ96DS6 147 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 UBXN10Q96LJ8 280 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 ZNF354BQ96LW1 612 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 HES7Q9BYE0 225 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 PHACTR1Q9C0D0 580 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 DNAJC11Q9NVH1 559 aa13.4□□□□□ -0.26
RAB28-205ENST00000508274 CELSR2Q9HCU4 2923 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 IGKV3D-11A0A0A0MRZ8 115 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 LRRTM2O43300 516 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 ERI3O43414 337 aaKnown RBP13.39□□□□□ -0.27
RAB28-205ENST00000508274 PRMT3O60678 531 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 WISP2O76076 250 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 RASAL1O95294 804 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 SLC35E2BP0CK96 405 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 RNH1P13489 461 aaKnown RBP13.39□□□□□ -0.27
RAB28-205ENST00000508274 CD22P20273 847 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 GGT5P36269 586 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 ATP6V0D1P61421 351 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 ILF2Q12905 390 aaKnown RBP13.39□□□□□ -0.27
RAB28-205ENST00000508274 TUBA3CQ13748 450 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 MEP1AQ16819 746 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 ZNF766Q5HY98 468 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms