RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PIP5K1AQ99755 562 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 ADAM2Q99965 735 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 CLSTN3Q9BQT9 956 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 DUSP26Q9BV47 211 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 MND1Q9BWT6 205 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 TTLL2Q9BWV7 592 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC12A9Q9BXP2 914 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 TPT1P8Q9HAU6 139 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 BRF2Q9HAW0 419 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZFYVE1Q9HBF4 777 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 BPIFA1Q9NP55 256 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 BRD7Q9NPI1 651 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 FARSBQ9NSD9 589 aaKnown RBP4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 STMN3Q9NZ72 180 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 GPRC5BQ9NZH0 403 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 FLRT1Q9NZU1 646 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 TBC1D14Q9P2M4 693 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 VPS29Q9UBQ0 182 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 KLHL21Q9UJP4 597 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 FBXO10Q9UK96 956 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 FZD4Q9ULV1 537 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 PADI3Q9ULW8 664 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 SSR3Q9UNL2 185 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 ANGPT4Q9Y264 503 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 DLGAP4Q9Y2H0 992 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 FNDC3AQ9Y2H6 1198 aaKnown RBP4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 N6AMT1Q9Y5N5 214 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 DOCK4Q8N1I0 1966 aa4.78□□□□□ -1.64
HMGB3P16-201ENST00000508037 KCNE1BA0A087WTH5 132 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CXorf51AA0A1B0GTR3 108 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 A0A1W2PQ67 120 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 MEIOCA2RUB1 952 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 KRT87PA6NCN2 255 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 MGAT4DA6NG13 374 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SNTNA6NMZ2 147 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 IQCF5A8MTL0 148 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 NT5C1B-RDH14C9J2C7 533 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 H3BNC9 293 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CACNB4O00305 520 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 QSOX1O00391 747 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RNASET2O00584 256 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF197O14709 1029 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SCAMP2O15127 329 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RGS5O15539 181 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 PROM1O43490 865 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 FZD6O60353 706 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 HCN1O60741 890 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMCC2O75069 709 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 GJB3O75712 270 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CPSF4O95639 269 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TBX18O95935 607 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ADAP00813 363 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 VIPP01282 170 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 IL1AP01583 271 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TRBC1P01850 177 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ALPPP05187 535 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ITGB1P05556 798 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CTSHP09668 335 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR4Q2P0C623 313 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CHRNB1P11230 501 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 IL7P13232 177 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 GABRB1P18505 474 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RHCEP18577 417 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ALAS2P22557 587 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CXCR2P25025 360 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 C21orf33P30042 268 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CD52P31358 61 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 GRK4P32298 578 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RCVRNP35243 200 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 THPOP40225 353 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 IL12RB1P42701 662 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CDKN2CP42773 168 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 GDF5P43026 501 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RGRP47804 291 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC6A12P48065 614 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 GPR15P49685 360 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 AFF1P51825 1210 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 HMGA2P52926 109 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 NKX2-5P52952 324 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SNRPGP62308 76 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SNRPNP63162 240 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 KCNJ10P78508 379 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 BEX3Q00994 111 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 BCL2L1Q07817 233 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 DSC1Q08554 894 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 C19orf57Q0VDD7 668 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 GPR17Q13304 367 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 NCF4Q15080 339 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 QPRTQ15274 297 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ANGPT1Q15389 498 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RGNQ15493 299 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 MED22Q15528 200 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TSTQ16762 297 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 AAK1Q2M2I8 961 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TBRG1Q3YBR2 411 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TRIM60Q495X7 471 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 BCL7AQ4VC05 210 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SPIN4Q56A73 249 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAM26DQ5JW98 314 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 PRSS36Q5K4E3 855 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms