RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 VSX1Q9NZR4 365 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 THAP10Q9P2Z0 257 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-206ENST00000507875 SORCS3Q9UPU3 1222 aa6.86□□□□□ -1.31
CLCN3-206ENST00000507875 A0A0J9YYE9 177 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 PSMD11O00231 422 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 GNB5O14775 395 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 LDB2O43679 373 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 USP12O75317 370 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 ATP5HO75947 161 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 IL1BP01584 269 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 TRBC1P01850 177 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 MPOP05164 745 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 SELLP14151 372 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 NQO1P15559 274 aaKnown RBP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 ALDH4A1P30038 563 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 CRHR1P34998 444 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 KIR2DL1P43626 348 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 KIR2DL2P43627 348 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 RGRP47804 291 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 KCNJ2P63252 427 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 BNIP3Q12983 259 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 COTL1Q14019 142 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 AARS2Q5JTZ9 985 aaKnown RBP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 SPDYAQ5MJ70 313 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 TEDDM1Q5T9Z0 273 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 AFTPHQ6ULP2 937 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 LINGO4Q6UY18 593 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 UNC5BQ8IZJ1 945 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 PIH1D2Q8WWB5 315 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 SLC5A11Q8WWX8 675 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 OR8D1Q8WZ84 308 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 RAB7BQ96AH8 199 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 RMDN1Q96DB5 314 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 FAM122AQ96E09 287 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 PPP1R16AQ96I34 528 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 MCCC1Q96RQ3 725 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 TXN2Q99757 166 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 PLA2G2FQ9BZM2 168 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 EBF3Q9H4W6 596 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 TFB2MQ9H5Q4 396 aaKnown RBP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 C20orf96Q9NUD7 363 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 TXLNGQ9NUQ3 528 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 SOHLH2Q9NX45 425 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 IL36AQ9UHA7 158 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 OR5K4A6NMS3 321 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 DRD1P21728 446 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 BGNP21810 368 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 SP100P23497 879 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 COL8A1P27658 744 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 NMBRP28336 390 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 HMGCLP35914 325 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 ZNF140P52738 457 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 OVGP1Q12889 678 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 SNCBQ16143 134 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 INSCQ1MX18 579 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 HNRNPA1L2Q32P51 320 aaKnown RBP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 KLHL24Q6TFL4 600 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 PARM1Q6UWI2 310 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 CD300LDQ6UXZ3 194 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 CERS6Q6ZMG9 384 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 TPRG1Q6ZUI0 275 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 SPARTQ8N0X7 666 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 SLC25A41Q8N5S1 370 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.85□□□□□ -1.31
CLCN3-206ENST00000507875 SCRN2Q96FV2 425 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 ATP6V0BQ99437 205 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 RBBP8Q99708 897 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 TMEM245Q9H330 911 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 RHOJQ9H4E5 214 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 SLC2A4RGQ9NR83 387 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 CHRAC1Q9NRG0 131 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 PCMTD2Q9NV79 361 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 APPL1Q9UKG1 709 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 PLEKHM1Q9Y4G2 1056 aa6.85□□□□□ -1.31
CLCN3-206ENST00000507875 C5orf42Q9H799 3197 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 CDHR4A6H8M9 788 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 AGAP5A6NIR3 686 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 C2CD4DB7Z1M9 353 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 GPR89AB7ZAQ6 455 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 C1QTNF3-AMACRE9PGA6 284 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 M0R296 226 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 SMAD6O43541 496 aaKnown RBP6.84□□□□□ -1.31
CLCN3-206ENST00000507875 PRSS23O95084 383 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 KAT7O95251 611 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 PABPC4LP0CB38 370 aaKnown RBP6.84□□□□□ -1.31
CLCN3-206ENST00000507875 GPR89BP0CG08 455 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 SLC26A3P40879 764 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 LEPRP48357 1165 aaKnown RBP6.84□□□□□ -1.31
CLCN3-206ENST00000507875 CLCN5P51795 746 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 LIMK2P53671 638 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 PRAMEP78395 509 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 POU6F2P78424 691 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-206ENST00000507875 MRPS21P82921 87 aaKnown RBP6.84□□□□□ -1.31
CLCN3-206ENST00000507875 RIPK1Q13546 671 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 IHHQ14623 411 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 POU6F1Q14863 301 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 CYP2A13Q16696 494 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 GPR33Q49SQ1 333 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 ACCSLQ4AC99 568 aa6.84□□□□□ -1.31
CLCN3-206ENST00000507875 FAM46CQ5VWP2 391 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms