RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 THAP1Q9NVV9 213 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 LYARQ9NX58 379 aaKnown RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 FOXJ2Q9P0K8 574 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 IFT80Q9P2H3 777 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 C19orf25Q9UFG5 118 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 PHF11Q9UIL8 331 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 ZNF490Q9ULM2 529 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 FARSAQ9Y285 508 aaKnown RBP8.04□□□□□ -1.12
PDGFC-205ENST00000506880 PKD1L2Q7Z442 2459 aa8.04□□□□□ -1.12
PDGFC-205ENST00000506880 SCN2AQ99250 2005 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 LOC105369274A0A096LPK9 316 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 LOC102723532A0A0G2JNH3 316 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 SLC28A1O00337 649 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 CLDN4O14493 209 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 B3GALT2O43825 422 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 LCMT2O60294 686 aaKnown RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 RSL1D1O76021 490 aaKnown RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 SIX3O95343 332 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 TGDSO95455 350 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 RNH1P13489 461 aaKnown RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 ICAM2P13598 275 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 CD22P20273 847 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 FBLP22087 321 aaKnown RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 GALNSP34059 522 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 RRADP55042 308 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 HSD17B7P56937 341 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 MAD2L1Q13257 205 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 DNASE1L3Q13609 305 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 ZRSR2Q15696 482 aaKnown RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 RBBP7Q16576 425 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 UGT8Q16880 541 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 AP5B1Q2VPB7 878 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 TTC19Q6DKK2 380 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 FRMPD2BQ6IN97 320 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 ABHD17CQ6PCB6 329 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 FAM198BQ6UWH4 519 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 QSOX2Q6ZRP7 698 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 TTLL10Q6ZVT0 673 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 C10orf107Q8IVU9 208 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 ZNF595Q8IYB9 648 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 OR4N4Q8N0Y3 316 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 TMEM102Q8N9M5 508 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 PLPP5Q8NEB5 264 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 OR4F6Q8NGB9 312 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 HUS1BQ8NHY5 278 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 PPP1R14CQ8TAE6 165 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 METTL6Q8TCB7 284 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 UTP15Q8TED0 518 aaKnown RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 MR1Q95460 341 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 COPS7BQ9H9Q2 264 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-205ENST00000506880 KCNK9Q9NPC2 374 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 VPS29Q9UBQ0 182 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 VTI1BQ9UEU0 232 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 CIDEBQ9UHD4 219 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 TUBD1Q9UJT1 453 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 RAP2CQ9Y3L5 183 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 PCDHGB7Q9Y5F8 929 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 WDFY3Q8IZQ1 3526 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 CROCCQ5TZA2 2017 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 SCN3AQ9NY46 2000 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 CCDC88CQ9P219 2028 aa8.03□□□□□ -1.12
PDGFC-205ENST00000506880 KRT87PA6NCN2 255 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 K7ENP7 123 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 PSMD12O00232 456 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 AZIN1O14977 448 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 RGS14O43566 566 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 FOXS1O43638 330 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 CRCPO75575 148 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 CREG1O75629 220 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 KLHL18O94889 574 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 SLITRK5O94991 958 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 TCN2P20062 427 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 HIST1H1TP22492 207 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 ALAS2P22557 587 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 MMP11P24347 488 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 MAPK1P28482 360 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 RPL3P39023 403 aaKnown RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 BUD31P41223 144 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 FOLR3P41439 243 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 RAP1GDS1P52306 607 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 SOX8P57073 446 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 PPP2R2AP63151 447 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 PSPHP78330 225 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 RHDQ02161 417 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 TLE3Q04726 772 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 VAC14Q08AM6 782 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 HYAL2Q12891 473 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 SERTAD2Q14140 314 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 CPSF6Q16630 551 aaKnown RBP eCLIP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 ARHGAP40Q5TG30 622 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 OR4C11Q6IEV9 310 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 LETMD1Q6P1Q0 360 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 C16orf46Q6P387 395 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 INO80CQ6PI98 192 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 FOXR1Q6PIV2 292 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 IKBIPQ70UQ0 350 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 NUDT13Q86X67 352 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 APLFQ8IW19 511 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 SPACA3Q8IXA5 215 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 METTL4Q8N3J2 472 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms