RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 TYSND1Q2T9J0 566 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 TCTEX1D4Q5JR98 221 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 FAM182AQ5T1J6 154 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 PLPP4Q5VZY2 271 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 ARMC3Q5W041 872 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 TCEAL6Q6IPX3 200 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 MACC1Q6ZN28 852 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 Q6ZVQ6 151 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 ANKRD46Q86W74 232 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 FAM131BQ86XD5 332 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 CROCCP3Q8IVE0 287 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 SIAH3Q8IW03 269 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 OR8H3Q8N146 312 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 NHLRC2Q8NBF2 726 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 ATAD1Q8NBU5 361 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 OR5M9Q8NGP3 310 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 RPLP0P6Q8NHW5 317 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 SNRNP40Q96DI7 357 aaKnown RBP2.35□□□□□ -2.03
GYPB-207ENST00000506679 BSCL2Q96G97 398 aaPredicted RBP2.35□□□□□ -2.03
GYPB-207ENST00000506679 SPATA17Q96L03 361 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 RASL10BQ96S79 203 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 PCDHB18PQ96TA0 734 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 PARK7Q99497 189 aaKnown RBP2.35□□□□□ -2.03
GYPB-207ENST00000506679 ADPGKQ9BRR6 497 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 UBXN6Q9BZV1 441 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 LSG1Q9H089 658 aaKnown RBP2.35□□□□□ -2.03
GYPB-207ENST00000506679 PANK3Q9H999 370 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 RPF1Q9H9Y2 349 aaKnown RBP2.35□□□□□ -2.03
GYPB-207ENST00000506679 GNB4Q9HAV0 340 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 TUFT1Q9NNX1 390 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 SH3GLB2Q9NR46 395 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 GPR173Q9NS66 373 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 MIS18AQ9NYP9 233 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 NLGN3Q9NZ94 848 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 UBQLN2Q9UHD9 624 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 PILRAQ9UKJ1 303 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 GTF3C4Q9UKN8 822 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 CSAG2Q9Y5P2 127 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 TP53BP1Q12888 1972 aaPredicted RBP2.35□□□□□ -2.03
GYPB-207ENST00000506679 HCFC1P51610 2035 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 RNF123Q5XPI4 1314 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 AGRNO00468 2067 aa2.35□□□□□ -2.03
GYPB-207ENST00000506679 KIAA1217Q5T5P2 1943 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 IGLV4-3A0A075B6K6 122 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 A0A1W2PRQ8 180 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 ASB14A6NK59 587 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 ZNF732B4DXR9 585 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 CTDSPLO15194 276 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 SIGLEC5O15389 551 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 TNFSF12O43508 249 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 MTRF1O75570 445 aaKnown RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 RPLP0P05388 317 aaKnown RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 EEF2P13639 858 aaKnown RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 GATA2P23769 480 aaPredicted RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 KRTAP5-9P26371 169 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 GIFP27352 417 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 CCND3P30281 292 aaPredicted RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 SOAT1P35610 550 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 FEN1P39748 380 aaKnown RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 FRKP42685 505 aaPredicted RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 KCNJ1P48048 391 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 NPBWR1P48145 328 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 CLCN4P51793 760 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 DSCR10P59022 87 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 ABCE1P61221 599 aaKnown RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 ERVK-16P61578 105 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 BTG1P62324 171 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 GPR50Q13585 617 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 RAPSNQ13702 412 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 KIAA0141Q14154 515 aaPredicted RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 ZNF146Q15072 292 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 MS4A18Q3C1V0 323 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 ARMCX4Q5H9R4 360 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 NHSL2Q5HYW2 709 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 LCE3CQ5T5A8 94 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 PODNL1Q6PEZ8 512 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 SLC47A2Q86VL8 602 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 CARM1Q86X55 608 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 OR9Q2Q8NGE9 314 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 AFAP1L1Q8TED9 768 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 ATP8B4Q8TF62 1192 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 SSC4DQ8WTU2 575 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 CKAP2Q8WWK9 683 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 ANKRD9Q96BM1 317 aaPredicted RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 FOXN4Q96NZ1 517 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 CCM2Q9BSQ5 444 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 TUBB1Q9H4B7 451 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 MRGBPQ9NV56 204 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 KLK11Q9UBX7 282 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 LEF1Q9UJU2 399 aaPredicted RBP2.34□□□□□ -2.03
GYPB-207ENST00000506679 ZNF510Q9Y2H8 683 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 MOB4Q9Y3A3 225 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 PCDHGA1Q9Y5H4 931 aa2.34□□□□□ -2.03
GYPB-207ENST00000506679 IQCMA0A1B0GVH7 501 aa2.33□□□□□ -2.04
GYPB-207ENST00000506679 A0A1B0GVY2 172 aa2.33□□□□□ -2.04
GYPB-207ENST00000506679 GTPBP10A4D1E9 387 aaKnown RBP2.33□□□□□ -2.04
GYPB-207ENST00000506679 SDR42E2A6NKP2 422 aa2.33□□□□□ -2.04
GYPB-207ENST00000506679 SRRM4A7MD48 611 aaKnown RBP2.33□□□□□ -2.04
GYPB-207ENST00000506679 ERI2A8K979 691 aaKnown RBP2.33□□□□□ -2.04
GYPB-207ENST00000506679 A8MU76 341 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms