RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PPEF2O14830 753 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 OGTO15294 1046 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 SYT7O43581 403 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 XPNPEP2O43895 674 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 CTSVO60911 334 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 STBD1O95210 358 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 PCCBP05166 539 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 IGKV2-30P06310 120 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 APRTP07741 180 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 CALCBP10092 127 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 TNNI3P19429 210 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 EFNA1P20827 205 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 LHCGRP22888 699 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 HLA-FP30511 346 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 DUTP33316 252 aaKnown RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 NR2C2P49116 596 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 MYL7Q01449 175 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 GABPAQ06546 454 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF260Q3ZCT1 412 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 PDLIM3Q53GG5 364 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 PDSS1Q5T2R2 415 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 ATAD3BQ5T9A4 648 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 IL23RQ5VWK5 629 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 NKAIN2Q5VXU1 208 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 HIST2H2AA3Q6FI13 130 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 TMEM26Q6ZUK4 368 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 CYP4V2Q6ZWL3 525 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 ARMCX2Q7L311 632 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 COX8CQ7Z4L0 72 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 CPEB2Q7Z5Q1 589 aaKnown RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 SAMD14Q8IZD0 417 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 DNAJC22Q8N4W6 341 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 MAPKAPK5-AS1Q8N8E1 139 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 GBP7Q8N8V2 638 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 TRPV3Q8NET8 790 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 OR52B4Q8NGK2 314 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 OR4C15Q8NGM1 316 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 OR13C3Q8NGS6 347 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 LNX1Q8TBB1 728 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 GLYATL1Q969I3 302 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 WBP2Q969T9 261 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 C16orf58Q96GQ5 468 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 GPR137Q96N19 417 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 NECTIN4Q96NY8 510 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 ERP44Q9BS26 406 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF416Q9BWM5 594 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 OR2B2Q9GZK3 357 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 FAM49AQ9H0Q0 323 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 CPVLQ9H3G5 476 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 DPEP3Q9H4B8 488 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 PELI2Q9HAT8 420 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 FARSBQ9NSD9 589 aaKnown RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 C19orf25Q9UFG5 118 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 NARFQ9UHQ1 456 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 PSORS1C1Q9UIG5 152 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 MAN1B1Q9UKM7 699 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 HPCAL4Q9UM19 191 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 SNX6Q9UNH7 406 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 R4GN57 208 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF521Q96K83 1311 aa3.53□□□□□ -1.84
TRAPPC13-208ENST00000505553 IGLV5-45A0A087WSX0 123 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 A0A0U1RRA0 63 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 FAM230AA0A1W2PPH8 454 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 DENND3A2RUS2 1198 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 H3BMM5 538 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 TULP2O00295 520 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 GRID2O43424 1007 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 APBB3O95704 486 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 EPOP01588 193 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 IGHV4-39P01824 125 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 IGHV4-31P0DP07 118 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 FGF5P12034 268 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 FCGR1AP12314 374 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 B4GALT1P15291 398 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZNF12P17014 697 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 FCARP24071 287 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 CYP2F1P24903 491 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 PSMA5P28066 241 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 RBMS1P29558 406 aaKnown RBP3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 PRDX6P30041 224 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 ALDH1B1P30837 517 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 SLC1A3P43003 542 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 ALDH3B1P43353 468 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 TNFRSF4P43489 277 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 HOXA1P49639 335 aaPredicted RBP3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 FUT6P51993 359 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 GBX2P52951 348 aaPredicted RBP3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 ACTR1AP61163 376 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 HSF2Q03933 536 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 HERC3Q15034 1050 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 SPHARQ15513 63 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 TPD52L1Q16890 204 aaPredicted RBP3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 FGD3Q5JSP0 725 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 DCAF10Q5QP82 559 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 LDLRAP1Q5SW96 308 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 SNRNP48Q6IEG0 339 aaKnown RBP3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 FAM159AQ6UWV7 190 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 C15orf52Q6ZUT6 534 aaKnown RBP3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 G2E3Q7L622 706 aa3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms