RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 TAGAPQ8N103 731 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 CLDN22Q8N7P3 220 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 SCAMP5Q8TAC9 235 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 TMEM40Q8WWA1 233 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 PTP4A1Q93096 173 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 SAMD11Q96NU1 681 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 ACBD6Q9BR61 282 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 ZFP64Q9NPA5 681 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 PTTG3PQ9NZH4 202 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 SH3BP4Q9P0V3 963 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 PCDHGB7Q9Y5F8 929 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 PCDHGA2Q9Y5H1 932 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 MBLAC1A4D2B0 266 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 LYRM1O43325 122 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 CELF2O95319 508 aaKnown RBP17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 ALDH1A1P00352 501 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 GLUD1P00367 558 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 CLEC2LP0C7M8 214 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 ZP3P21754 424 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 PSMA1P25786 263 aaKnown RBP17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 CCT3P49368 545 aaKnown RBP17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 TPMTP51580 245 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 CLDN8P56748 225 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 GNA13Q14344 377 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 DMC1Q14565 340 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 TAF1AQ15573 450 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 IQCCQ4KMZ1 466 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 DDI2Q5TDH0 399 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 SCD5Q86SK9 330 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 TRIM69Q86WT6 500 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 TIGD4Q8IY51 512 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 RBFAQ8N0V3 343 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 UFD1Q92890 307 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 PDXPQ96GD0 296 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 EXOC2Q96KP1 924 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 PKMYT1Q99640 499 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 HTATIP2Q9BUP3 242 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 MCCC2Q9HCC0 563 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 IFT46Q9NQC8 304 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 FARSBQ9NSD9 589 aaKnown RBP17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 FAM105AQ9NUU6 356 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 STUB1Q9UNE7 303 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 KLF2Q9Y5W3 355 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 PATJQ8NI35 1801 aa17.17■□□□□ 0.34
POLR2J3-209ENST00000504157 HYKKA2RU49 373 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 PLOD3O60568 738 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 IL1AP01583 271 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 TP53P04637 393 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 MMP3P08254 477 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 PIRTP0C851 137 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 S100A3P33764 101 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 SERINC3Q13530 473 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 TRIQKQ629K1 86 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 PLAG1Q6DJT9 500 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 OR4K2Q8NGD2 314 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 CCM2Q9BSQ5 444 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 SHARPINQ9H0F6 387 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 PLEKHB1Q9UF11 243 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 UBQLN2Q9UHD9 624 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 TRPS1Q9UHF7 1281 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 OGDHLQ9ULD0 1010 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 CSADQ9Y600 493 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 AP1M2Q9Y6Q5 423 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 PAPPA2Q9BXP8 1791 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 HAS3O00219 553 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 SLC2A2P11168 524 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 BCKDHAP12694 445 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 SSTR4P31391 388 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 KDELR2P33947 212 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 EXOSC2Q13868 293 aaKnown RBP17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 VMACQ2NL98 169 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 RGMBQ6NW40 437 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 SBSNQ6UWP8 590 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 RASGRP3Q8IV61 690 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 ATP6V1C2Q8NEY4 427 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 WDR36Q8NI36 951 aaKnown RBP17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 HSH2DQ96JZ2 352 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 ZFP42Q96MM3 310 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 HHIPQ96QV1 700 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 GFM1Q96RP9 751 aaKnown RBP17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 USB1Q9BQ65 265 aaKnown RBP17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 FOLH1BQ9HBA9 442 aa17.16■□□□□ 0.34
POLR2J3-209ENST00000504157 SH3D21A4FU49 640 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 GJB3O75712 270 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 PTX3P26022 381 aaPredicted RBP17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 ABRQ12979 859 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 C18orf21Q32NC0 220 aaPredicted RBP17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 SLC39A12Q504Y0 691 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 ALFQ53S48 1182 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 ZNF628Q5EBL2 1059 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 TFAP2EQ6VUC0 442 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 CFAP77Q6ZQR2 320 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 C1orf52Q8N6N3 182 aaKnown RBP17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 RIT1Q92963 219 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 USP7Q93009 1102 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 SOSTQ9BQB4 213 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 INPP5KQ9BT40 448 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 CD244Q9BZW8 370 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 ARHGAP39Q9C0H5 1083 aa17.15■□□□□ 0.34
POLR2J3-209ENST00000504157 PHF11Q9UIL8 331 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms