RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CYP17A1P05093 508 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 CISD3P0C7P0 127 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 C1GALT1C1LP0DN25 315 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 IRS1P35568 1242 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 TGFBR1P36897 503 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 PNLIPRP1P54315 467 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 NCS1P62166 190 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 TAP2Q03519 686 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 ITGADQ13349 1161 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 PDE7AQ13946 482 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 DHCR24Q15392 516 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 CYP27C1Q4G0S4 372 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 PRSS48Q7RTY5 328 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF547Q8IVP9 402 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 SVOPQ8N4V2 548 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 MRPL43Q8N983 215 aaKnown RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF740Q8NDX6 193 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 OR52J3Q8NH60 311 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 OR5AK3PQ8NH89 298 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 NFKBIDQ8NI38 313 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 HCAR2Q8TDS4 363 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 C16orf78Q8WTQ4 265 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 FEVQ99581 238 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 EPHX3Q9H6B9 360 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 TRIM39Q9HCM9 518 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 CCNB1IP1Q9NPC3 277 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 NECTIN3Q9NQS3 549 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 RLIMQ9NVW2 624 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 IRAK4Q9NWZ3 460 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 B3GNT3Q9Y2A9 372 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 DYRK1BQ9Y463 629 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 PMF1-BGLAPU3KQ54 211 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 NUP210Q8TEM1 1887 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 MUC22E2RYF6 1773 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 OR2A25A4D2G3 310 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 CLDN25C9JDP6 229 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 BOLA2-SMG1P6H3BVE0 249 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 PSMD11O00231 422 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 SRPRAP08240 638 aaKnown RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 CEBPBP17676 345 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 TGFBR2P37173 567 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 ST13P50502 369 aaKnown RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 TAS2R50P59544 299 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 HTRA4P83105 476 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 HTRA3P83110 453 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 MVKQ03426 396 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 FCHO2Q0JRZ9 810 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 PPIGQ13427 754 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 SCARB2Q14108 478 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 GCNT6Q5T4J0 391 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF697Q5TEC3 545 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 TMEM236Q5W0B7 351 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 RAET1GQ6H3X3 334 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 TRMT11Q7Z4G4 463 aaKnown RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 GRASPQ7Z6J2 395 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 MMP21Q8N119 569 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 SLC5A8Q8N695 610 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 OR52N2Q8NGI0 321 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 OR4C15Q8NGM1 316 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 OR9A1PQ8NGU1 263 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 SLC5A11Q8WWX8 675 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 RPL3LQ92901 407 aaKnown RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 NXPE3Q969Y0 559 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 ARRDC3Q96B67 414 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 PPCDCQ96CD2 204 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 EFCAB11Q9BUY7 163 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 BTBD2Q9BX70 525 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 PCYT1BQ9Y5K3 369 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 AP1M2Q9Y6Q5 423 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 NINQ8N4C6 2090 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 M0R3G1 203 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF197O14709 1029 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 ADAMDEC1O15204 470 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 KLK1P06870 262 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 EPCAMP16422 314 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 FUT4P22083 530 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 CDH12P55289 794 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 SPIBQ01892 262 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 KCNC4Q03721 635 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 OCA2Q04671 838 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 C2orf80Q0P641 193 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 LRRC74AQ0VAA2 488 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 NFE2L1Q14494 772 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF846Q147U1 533 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 SLC5A12Q1EHB4 618 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 RGS21Q2M5E4 152 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 IFI44LQ53G44 452 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 PAGE2BQ5JRK9 111 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 FAM71E1Q6IPT2 247 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 FAM180BQ6P0A1 224 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 NXPE4Q6UWF7 544 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 RNF130Q86XS8 419 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLIP1-204ENST00000501271 OR10G2Q8NGC3 310 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 DYNC2LI1Q8TCX1 351 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 IPCEF1Q8WWN9 437 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-204ENST00000501271 OTUB2Q96DC9 234 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 NUS1Q96E22 293 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 VMP1Q96GC9 406 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 IL17FQ96PD4 163 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms