RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 PIWIL4Q7Z3Z4 852 aaKnown RBP13□□□□□ -0.33
CCDC58-207ENST00000498466 CPNE9Q8IYJ1 553 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 ARMC10Q8N2F6 343 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 NFAM1Q8NET5 270 aaPredicted RBP13□□□□□ -0.33
CCDC58-207ENST00000498466 KCNJ9Q92806 393 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 RMND5BQ96G75 393 aaPredicted RBP13□□□□□ -0.33
CCDC58-207ENST00000498466 HES6Q96HZ4 224 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 PWWP2AQ96N64 755 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 GPATCH1Q9BRR8 931 aaKnown RBP13□□□□□ -0.33
CCDC58-207ENST00000498466 ATG10Q9H0Y0 220 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 CLEC4MQ9H2X3 399 aaPredicted RBP13□□□□□ -0.33
CCDC58-207ENST00000498466 TIMMDC1Q9NPL8 285 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 ZNF358Q9NW07 568 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 EDARQ9UNE0 448 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 PLEKHA6Q9Y2H5 1048 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 INTS1Q8N201 2190 aaKnown RBP13□□□□□ -0.33
CCDC58-207ENST00000498466 SCN3AQ9NY46 2000 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 TCRBV16S1A1N1A0A5B0 115 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 FIGNL2A6NMB9 653 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 FAM166BA8MTA8 275 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 ACOT7O00154 380 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 PSMD12O00232 456 aaPredicted RBP12.99□□□□□ -0.33
CCDC58-207ENST00000498466 OR1F1O43749 312 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 CEP104O60308 925 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 TUBB4AP04350 444 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 ZNF888P0CJ79 500 aaPredicted RBP12.99□□□□□ -0.33
CCDC58-207ENST00000498466 FOSL1P15407 271 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 ZFP36L2P47974 494 aaKnown RBP12.99□□□□□ -0.33
CCDC58-207ENST00000498466 DGKQP52824 942 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 DLX5P56178 289 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 NAE1Q13564 534 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 NIPAL1Q6NVV3 410 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 CASC4Q6P4E1 433 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 AGTRAPQ6RW13 159 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 ARSKQ6UWY0 536 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 RAD9BQ6WBX8 426 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 B3GNT6Q6ZMB0 384 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 MBOAT1Q6ZNC8 495 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 SLC13A5Q86YT5 568 aaPredicted RBP12.99□□□□□ -0.33
CCDC58-207ENST00000498466 ARMC2Q8NEN0 867 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 CREB3L4Q8TEY5 395 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 GPR21Q99679 349 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 TTYH2Q9BSA4 534 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 TSGA10Q9BZW7 698 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 TRIM5Q9C035 493 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 TSPY26PQ9H489 355 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 DLL4Q9NR61 685 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 FBXO6Q9NRD1 293 aaPredicted RBP12.99□□□□□ -0.33
CCDC58-207ENST00000498466 KCMF1Q9P0J7 381 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 ERVK-11Q9UQG0 969 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 MED16Q9Y2X0 877 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 DHRS7Q9Y394 339 aa12.99□□□□□ -0.33
CCDC58-207ENST00000498466 SLC16A5O15375 505 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 PROM1O43490 865 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 MYO1DO94832 1006 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 CCND1P24385 295 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 SSR4P51571 173 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 CCR8P51685 355 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 RGS1Q08116 209 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 PWP1Q13610 501 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 THOC5Q13769 683 aaKnown RBP12.98□□□□□ -0.33
CCDC58-207ENST00000498466 SNTB1Q13884 538 aaKnown RBP12.98□□□□□ -0.33
CCDC58-207ENST00000498466 ZNF549Q6P9A3 640 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 LCTLQ6UWM7 567 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 C4orf22Q6V702 233 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 ABHD13Q7L211 337 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 GSTA5Q7RTV2 222 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 DENND6AQ8IWF6 608 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 APCDD1LQ8NCL9 501 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 PSD4Q8NDX1 1056 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 B3GNT7Q8NFL0 401 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 GOT1L1Q8NHS2 421 aaPredicted RBP12.98□□□□□ -0.33
CCDC58-207ENST00000498466 CD200R1Q8TD46 325 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 ALPK1Q96QP1 1244 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 SMC6Q96SB8 1091 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 RHBGQ9H310 441 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 NECTIN3Q9NQS3 549 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 DEPPQ9NTK1 212 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 ADAMTS6Q9UKP5 1117 aa12.98□□□□□ -0.33
CCDC58-207ENST00000498466 RPH3AQ9Y2J0 694 aaPredicted RBP12.98□□□□□ -0.33
CCDC58-207ENST00000498466 IGKV3D-11A0A0A0MRZ8 115 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 A0A0G2JNJ9 132 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 PINLYPA6NC86 204 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 OR14I1A6ND48 311 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 A8MVJ9 347 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 BCKDKO14874 412 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 GLI4P10075 376 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 NPPBP16860 134 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 KIR2DL3P43628 341 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 TERF1P54274 439 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 ADAM8P78325 824 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 LTBQ06643 244 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 KIF5AQ12840 1032 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 CTBP1Q13363 440 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 DHX34Q14147 1143 aaKnown RBP12.97□□□□□ -0.33
CCDC58-207ENST00000498466 RGS9BPQ6ZS82 235 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 KIAA0408Q6ZU52 694 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 WDR53Q7Z5U6 358 aaPredicted RBP12.97□□□□□ -0.33
CCDC58-207ENST00000498466 SLC22A16Q86VW1 577 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms